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Job DescriptionP37013
Confidence99.14%DateThu Jan 5 11:54:23 GMT 2012
Rank90Aligned Residues160
% Identity17%Templatec2p65A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein pf08_0063; PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHV
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Template Sequence  AGKLDPVIGRDTEIRRAIQILSR. . RTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAKY
Template Known Secondary structure  TT
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   18.20.........30.........40 .........50.........60.........70.........80.........90.....
 
   261........270. ........280.........290. ........300.........310.........320.........330
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Query Sequence  KGAFTGAISNR. SGKFEMADNGTLFLDEIGEL. . . . . . . . . SLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRD
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Template Sequence  RGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGE. . . . . . . . . . . . . LRCIGATT. .
Template Known Secondary structure  TTTSTTGGGGSSSSSS
TTS

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   96...100.........110.........120.........130.........140.........150.. .......160
 
   331........340.........350.......
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Query Sequence  LREEVLAGRFRADLFHRLSVFPLSVPP
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Template Sequence  VSEYRQFIEKDKALERRFQQILVEQPS
Template Known Secondary structure  TTT


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   161........170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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