Job Description P37013 Confidence 95.28% Date Thu Jan 5 11:54:23 GMT 2012 Rank 170 Aligned Residues 132 % Identity 13% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.									.	.
Query SS confidence																																																.	.	.									.	.
Query Sequence		G	M	T	Q	L	K	K	E	I	E	I	V	A	A	S	D	L	N	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	S	P	R	A	V	N	P	.	.	.	L	V	Y	L	N	C	A	A	.	.	L	P	E	S	V	A	E	S	E	L	F	G	H	V	K	G	A	F	T	G	A
Query Conservation																																																.	.	.									.	.
Alig confidence															.	.																																.	.	.									.	.																					.
Template Conservation															.	.																																																																	.
Template Sequence		Q	L	E	T	L	K	R	I	I	E	K	S	E	.	.	G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	.
Template Known Secondary structure												T		S	.	.	S								S	S	S	S															T	S				T	T	T							S	S	S		B													T	S			S	S	S	.
Template Predicted Secondary structure															.	.																																																																	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	N	R	S	G	K	F	E	M	A	D	N	G	T	L	F	L	D	E	I	G	E	L	S	L	A	L	Q	A	K	L	L	R	V	L	Q	Y	G	D	I	Q	R	V	G	D	D	R	C	L	R	V	D	V	R	V	L	A	A	T	N	R	D	L	R	E	E	V	L	A	G	R	F	R	A	D	L	F	H	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	R	K	Y	V	I	V	H	D	C	E	R	X	T	Q	Q	A	A	N	A	F	L	K	A	L	E	E	.	.	.	.	.	.	.	.	.	.	.	P	P	E	Y	A	V	I	V	L	N	T	R	R	W	.	.	.	.	.	.	.	H	Y	L	L	P	T	I	K	S	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S	S						T	T	G	G	G	B								T						S	.	.	.	.	.	.	.	.	.	.	.			T	T								S		G	.	.	.	.	.	.	.	G	G	S						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
													89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	F	P	L	S	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	R	V	V	V	N	V	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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