Job Description P37013 Confidence 98.46% Date Thu Jan 5 11:54:23 GMT 2012 Rank 132 Aligned Residues 230 % Identity 16% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		E	A	V	K	Q	T	Q	M	I	G	L	S	P	G	M	T	Q	L	K	K	E	I	E	I	V	A	A	S	D	L	N	.	.	.	.	.	.	.	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	.	.	.	.	.	.	S	P	R	A	V	N	P	L	V	Y	L	N	C	A	A
Query Conservation																																	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	Y	I	P	P	E	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y	V	N	A	F	N
Template Known Secondary structure		T	T				S	S		S	S	S	S																	T													T	T			S	S	S																			T	T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		247	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure					.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Query SS confidence					.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Query Sequence		L	P	E	.	.	.	.	.	S	V	A	E	S	E	L	F	G	H	V	K	G	A	F	T	G	A	I	S	N	R	S	G	K	F	E	.	.	.	.	M	A	D	N	G	T	L	F	L	D	E	I	G	E	.	.	.	.	.	.	L	S	L	A	L	Q	A	K	L	L	R	V	L	Q	Y	G	D	I	Q	R	V
Query Conservation					.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.
Alig confidence					.	.	.	.	.																												.	.	.	.															.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	.	.	.	.	.	I
Template Known Secondary structure				S													T						T	T																		T									S	T					S		T	T	S										T					.	.	.	.	.	S
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	D	R	C	L	R	V	D	V	R	V	L	A	A	T	N	R	D	L	R	E	E	V	L	A	G	R	F	R	A	D	L	F	H	R	L	S	V	F	P	L	S	V	P	P	L	R	E	R	G	D	D	V	I	L	L	A	G	Y	F	C	E	Q	C	R	L	R	Q	G	L	S	R	V	V	L	S	A	G	A
Query Conservation
Alig confidence																												.	.	.																				.	.
Template Conservation																												.	.	.																				.	.
Template Sequence		P	S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	.	.	.	K	I	P	Q	V	E	S	Q	I	G	F	K	L	H	L	P	A	Y	K	.	.	S	R	E	L	Y	T	I	L	E	Q	R	A	E	L	G	L	R	D	T	V	W	E	P	R	H	L	E	L	I	S
Template Known Secondary structure				T	T	S													T									.	.	.							T	T		S										.	.																B		G	G	G
Template Predicted Secondary structure																												.	.	.																				.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	L	L	Q	H	Y	S	F	P	G	N	V	R	E	L	E	H	A	I	H	R	A	V	V	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	Y	G	E	D	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A	E
Template Known Secondary structure						G	G	G	T	S																			G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions