Job Description P37013 Confidence 98.67% Date Thu Jan 5 11:54:23 GMT 2012 Rank 128 Aligned Residues 203 % Identity 14% Template c1sxjE_ PDB info PDB header:replication Chain: E: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	E	A	V	K	Q	T	Q	M	I	G	L	S	P	G	M	T	Q	L	K	K	E	I	E	I	V	A	A	S	D	L	N	V	L	I	S	G	E	T	G	T	G	K	E	L	V	A	K	A	I	H	E	A	S	P	R	A	V	N	P	L	V	Y	L	N	C	A	A	L	P	E	S	V	A	E	S	E	L	F
Query Conservation
Alig confidence																										.																											.	.	.																			.	.	.	.	.	.
Template Conservation																										.																											.	.	.																			.	.	.	.	.	.
Template Sequence		K	Y	R	P	K	S	L	N	A	L	S	H	N	E	E	L	T	N	F	L	K	S	L	S	.	D	Q	P	R	D	L	P	H	L	L	L	Y	G	P	N	G	T	G	K	K	T	R	C	M	A	L	.	.	.	L	E	S	I	F	G	P	G	V	Y	R	N	V	V	S	S	P	Y	.	.	.	.	.	.	H	L
Template Known Secondary structure		T	T				S	G	G	G			S										T	T	T	.	T		T	T										S	T	T	S	S							T		.	.	.					S		T	T									S	S	.	.	.	.	.	.
Template Predicted Secondary structure																										.																											.	.	.																			.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		G	H	V	K	G	A	F	T	G	A	I	S	N	R	S	G	K	F	E	M	A	D	N	G	T	.	.	L	F	L	D	E	I	G	E	L	S	L	A	L	Q	A	K	L	L	R	V	L	Q	Y	G	D	I	Q	R	V	G	D	D	R	C	L	R	V	D	V	R	V	L	A	A	T	N	R	D	L	R	E	E	V
Query Conservation																											.	.
Alig confidence																											.	.																								.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		E	I	T	P	S	N	D	R	I	V	I	Q	E	L	L	K	E	V	A	Q	M	E	Q	R	Y	K	C	V	I	I	N	E	A	N	S	L	T	K	D	A	Q	A	A	L	R	R	T	M	E	K	.	.	.	.	.	.	.	.	.	.	.	Y	S	K	N	I	R	L	I	M	V	C	D	S	M	S	.	.	.	.
Template Known Secondary structure																				T	T	T	T											T	T	S	S															.	.	.	.	.	.	.	.	.	.	.	S	T	T	T								S		S		.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.												.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	R	F	R	A	D	L	F	H	R	L	S	V	F	P	L	S	V	P	P	L	R	E	R	G	D	D	V	I	L	L	A	G	Y	F	C	E	Q	C	R	L	R	Q	G	L	S	R	V	V	L	S	A	G	A	R	N	L	L	Q	H	Y	S	F	P	G	N	V	R	E	L	E	H	A	I	H	R	A	V
Query Conservation
Alig confidence		.	.	.																										.	.	.	.	.	.	.	.													.	.															.
Template Conservation		.	.	.																										.	.	.	.	.	.	.	.													.	.															.
Template Sequence		.	.	.	P	I	I	A	P	I	K	S	Q	C	L	L	I	R	C	P	A	P	S	D	S	E	I	S	T	.	.	.	.	.	.	.	.	I	L	S	D	V	V	T	N	E	R	I	Q	.	.	L	E	T	K	D	I	L	K	R	I	A	Q	A	S	.	N	G	N	L	R	V	S	L	L	M	L	E	S	M	A
Template Known Secondary structure		.	.	.	S	S						T	T	S																.	.	.	.	.	.	.	.										T			.	.				S											.	T	T										T
Template Predicted Secondary structure		.	.	.																										.	.	.	.	.	.	.	.													.	.															.
Template SS confidence
					176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		416	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	N	E
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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