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Job DescriptionP37013
Confidence99.81%DateThu Jan 5 11:54:23 GMT 2012
Rank12Aligned Residues226
% Identity20%Templatec1r6bX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200..... ....210.........220.........230.........240.........250......
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Query Sequence  QTQMIGLSPGMTQLKKEIEIVA. . . . . . . ASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESEL
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Template Sequence  KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG. . . IELLRFDMSEYMERHTVSRL
Template Known Secondary structure  TTTS
S
TT
S
TTS
S
STTSST...
GGG
SSSS

SSS
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   457..460.........470.........480.........490.........500.........510... ......520.........530...
 
   257..260.........270. ........280.........290.........300.........310.........320.........330.....
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Query Sequence  FGHVKGAFTGAISNR. SGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEV
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Template Sequence  IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRAME
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S
STT
SSTGGGS
STTT
TT
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   534.....540.........550.........560.........570.........580.........590.........600.........610...
 
   336 ...340.........350.........360.........370.........380...... ...390....... ..400.........410
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Query Sequence  L. AGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVV. . LSAGARNLLQH. . YSFPGNVRELEHA
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Template Sequence  EIKKIFTPEFRNRLDNI. IWFDHL. . STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV
Template Known Secondary structure  S
TT
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BTTTBTTT
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   631........640....... ..650... ......660.........670.........680.........690.........700.......
 
   411....
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Query Sequence  IHRAV
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Template Sequence  IQDNL
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   708.710..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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