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Job DescriptionP37013
Confidence99.82%DateThu Jan 5 11:54:23 GMT 2012
Rank9Aligned Residues216
% Identity20%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.... .....210.........220.........230.........240.........250.......
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Query Sequence  TQMIGLSPGMTQLKKEIEIV. . . . . . . AASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELF
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Template Sequence  KRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLQ
Template Known Secondary structure  TTS
S
GGGTS
SSS
SBSSSSSSSSGGG
TTT

SSGGGGG

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   558.560.........570.........580.........590.........600.........610.........620.........630.......
 
   258.260.........270.........280.........290.........300.........310.........320.........330......
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Query Sequence  GHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVL.
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Template Sequence  LTEA. . . . . . . . . . . . . VRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEG
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SSSSGGGS
TTT

SSS


TT

TT
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   652... ....660.........670.........680.........690.........700.........710........
 
   337..340.........350.........360.........370.........380...... ...390......
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Query Sequence  . . . . . . . . . . . . . . . . . . AGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVV. . LSAGARNLLQ
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Template Sequence  LQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI. VVFRPLTK. . EQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLA
Template Known Secondary structure  TT

TTTS
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SB
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B




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   719720.........730.........740.........750. ........ 760.........770.........780.........790.....
 
   397..400.........410......
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Query Sequence  . . HYSFPGNVRELEHAIHRAVV
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Template Sequence  ERGYDPVFGARPLRRVIQRELE
Template Known Secondary structure 
BTTTBTST
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   796...800.........810.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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