Job Description P37617 Confidence 100.00% Date Thu Jan 5 11:55:52 GMT 2012 Rank 2 Aligned Residues 614 % Identity 34% Template c3rfuC_ PDB info PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase Resolution 3.20 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																				.	.	.
Query SS confidence																																.	.	.	.	.																				.	.	.
Query Sequence		A	E	E	P	Q	A	S	R	L	K	E	N	L	P	L	I	T	L	I	V	M	M	A	I	S	W	G	L	E	Q	.	.	.	.	.	F	N	H	P	F	G	Q	L	A	F	I	A	T	T	L	V	G	L	Y	.	.	.	P	I	A	R	Q	A	L	R	L	I	K	S	G	S	Y	F	A	I	E	T	L	M	S
Query Conservation																																.	.	.	.	.																				.	.	.
Alig confidence																																.	.	.	.	.																				.	.	.															.
Template Conservation																																																																									.
Template Sequence		S	P	E	Y	L	D	M	R	R	R	F	W	I	A	L	M	L	T	I	P	V	V	I	L	E	M	G	G	H	G	L	K	H	F	I	S	G	N	G	S	S	W	I	Q	L	L	L	A	T	P	V	V	L	W	G	G	W	P	F	F	K	R	G	W	Q	S	L	K	T	G	Q	.	L	N	M	F	T	L	I	A
Template Known Secondary structure																												S				T	T	S	S		S	T	T																T	T	T												T	T	S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.
		189	190	.	.	.	.	.	.	.	.																								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Query Sequence		V	A	A	I	G	A	L	F	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	A	E	A	A	M	V	L	L	L	F	L	I	G	E	R	L	E	G	W	A	A	S	R	A	R	Q	G	V	S	A	L	M	A	L	K	P	E	T	A	T	R	L	.	R	K
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		M	G	I	G	V	A	W	I	Y	S	M	V	A	V	L	W	P	G	V	F	P	H	A	F	R	S	Q	E	G	V	V	A	V	Y	F	E	A	A	A	V	I	T	T	L	V	L	L	G	Q	V	L	E	L	K	A	R	E	Q	T	G	S	A	I	R	A	L	L	K	L	V	P	E	S	A	H	R	I	K	E	D
Template Known Secondary structure																		G	G	G	S		S	S	S	S		S	S	S																															S	S						T												T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	R	E	E	V	A	I	N	S	L	R	P	G	D	V	I	E	V	A	A	G	G	R	L	P	A	D	G	K	L	L	S	P	F	A	S	F	D	E	S	A	L	T	G	E	S	I	P	V	E	R	A	T	G	D	K	V	P	A	G	A	T	S	V	D	R	L	V	T	L	E	V	L	S	E	P	G	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	E	E	E	V	S	L	D	N	V	A	V	G	D	L	L	R	V	R	P	G	E	K	I	P	V	D	G	E	V	Q	E	G	R	S	F	V	D	E	S	M	V	T	G	E	P	I	P	V	A	K	E	A	S	A	K	V	I	G	A	T	I	N	Q	T	G	S	F	V	M	K	A	L	H	V	G	S	D	T
Template Known Secondary structure									T	T	T			T	T							S	S					S						S	S							S	S	S	T	T		S	S						T	T					T	T					S											S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	I	D	R	I	L	K	L	I	E	E	A	E	E	R	R	A	P	I	E	R	F	I	D	R	F	S	R	I	Y	T	P	A	I	M	A	V	A	L	L	V	T	L	V	P	P	L	L	F	A	A	S	.	W	Q	E	W	I	Y	K	G	L	T	L	L	L	I	G	C	P	C	A	L	V	I	S	T	P	A	A
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		M	L	A	R	I	V	Q	M	V	S	D	A	Q	R	S	R	A	P	I	Q	R	L	A	D	T	V	S	G	W	F	V	P	A	V	I	L	V	A	V	L	S	F	I	V	W	A	L	L	G	P	Q	P	A	L	S	Y	G	L	I	A	A	V	S	V	L	I	I	A	C	P	C	A	L	G	L	A	T	P	M	S
Template Known Secondary structure															S	S																																			S	S	S	S	T	T																S	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	S	G	L	A	A	A	A	R	R	G	A	L	I	K	G	G	A	A	L	E	Q	L	G	R	V	T	Q	V	A	F	D	K	T	G	T	L	T	V	G	K	P	R	V	T	A	I	H	P	A	T	G	I	S	E	S	E	L	L	T	L	A	A	A	V	E	Q	G	A	T	H	P	L	A	Q	A	I	V	R
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		I	M	V	G	V	G	K	G	A	Q	S	G	V	L	I	K	N	A	E	A	L	E	R	M	E	K	V	N	T	L	V	V	D	K	T	G	T	L	T	E	G	H	P	K	L	T	R	I	V	T	.	D	D	F	V	E	D	N	A	L	A	L	A	A	A	L	E	H	Q	S	E	H	P	L	A	N	A	I	V	H
Template Known Secondary structure												T	T				S									T	S									B	T	T	T	B		S	S									.	S	S	S															S	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.						.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		E	A	Q	V	A	E	L	A	I	P	T	A	E	S	Q	R	A	L	V	G	S	G	I	E	A	Q	V	N	G	E	R	V	L	I	C	A	A	G	K	H	.	.	.	.	.	P	A	D	A	F	T	G	L	I	N	E	L	E	S	A	G	Q	T	V	V	L	V	V	R	N	D	D	V	L	G	V	I	A	L	Q
Query Conservation																																										.	.	.	.	.
Alig confidence																																										.	.	.	.	.
Template Conservation
Template Sequence		A	A	K	E	K	G	L	S	L	G	S	V	E	A	F	E	A	P	T	G	K	G	V	V	G	Q	V	D	G	H	H	V	A	I	G	N	A	R	L	M	Q	E	H	G	G	D	N	A	P	L	F	E	K	A	D	E	L	R	G	K	G	A	S	V	M	F	M	A	V	D	G	K	T	V	A	L	L	V	V	E
Template Known Secondary structure					T	T								S						T	T	T						S	S	S	S						S																								T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.		.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																																											.																							.
Query SS confidence																																											.																							.
Query Sequence		D	T	L	R	A	D	A	A	T	A	I	S	E	L	N	A	L	G	V	K	G	V	I	L	T	G	D	N	P	R	A	A	A	A	I	A	G	E	L	G	L	.	E	F	K	A	G	L	L	P	E	D	K	V	K	A	V	T	E	L	N	Q	H	A	.	P	L	A	M	V	G	D	G	I	N	D	A	P	A	M
Query Conservation																																											.																							.
Alig confidence																																											.																							.
Template Conservation
Template Sequence		D	P	I	K	S	S	T	P	E	T	I	L	E	L	Q	Q	S	G	I	E	I	V	M	L	T	G	D	S	K	R	T	A	E	A	V	A	G	T	L	G	I	K	K	V	V	A	E	I	M	P	E	D	K	S	R	I	V	S	E	L	K	D	K	G	L	I	V	A	M	A	G	D	G	V	N	D	A	P	A	L
Template Known Secondary structure				B		S	S												T								S	S													T							S																	S									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.								.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.
Query Sequence		K	A	A	A	I	G	I	A	M	G	S	G	T	D	V	A	L	E	T	A	D	A	A	L	T	H	N	H	L	R	G	L	V	Q	M	I	E	L	A	R	A	T	H	A	N	I	R	Q	N	I	T	I	A	L	G	L	K	G	I	F	L	V	T	T	L	L	G	M	.	.	.	.	.	.	.	T	G	L	W	L
Query Conservation																																																																						.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	A	D	I	G	I	A	M	G	T	G	T	D	V	A	I	E	S	A	G	V	T	L	L	H	G	D	L	R	G	I	A	K	A	R	R	L	S	E	S	T	M	S	N	I	R	Q	N	L	F	F	A	F	I	Y	N	V	L	G	V	P	L	A	A	G	V	L	Y	P	L	T	G	L	L	L	S	P	M	I
Template Known Secondary structure				S	S						S	S	S		S							S					S			S	T	T																																			T	S	S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	A	D	T	G	A	T	V	L	V	T	A	N	A	L	R	L	L	R	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	A	M	A	L	S	S	V	S	V	I	I	N	A	L	R	L	K	R	V	T
Template Known Secondary structure																			T				T	T
Template Predicted Secondary structure
Template SS confidence
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.