Job Description P37617 Confidence 100.00% Date Thu Jan 5 11:55:52 GMT 2012 Rank 1 Aligned Residues 684 % Identity 33% Template c3j09A_ PDB info PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa Resolution 10.00 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.
Predicted Secondary structure																																																				.	.																				.	.	.
Query SS confidence																																																				.	.																				.	.	.
Query Sequence		G	T	R	Y	S	W	K	V	S	G	M	D	C	A	A	C	A	R	K	V	E	N	A	V	R	Q	L	A	G	V	N	Q	V	Q	V	L	F	A	T	E	K	L	V	V	D	A	D	N	D	I	.	.	R	A	Q	V	E	S	A	L	Q	K	A	G	Y	S	L	R	D	E	Q	.	.	.	A	A	E	E	P	Q
Query Conservation																																																				.	.																				.	.	.
Alig confidence																																																				.	.																				.	.	.
Template Conservation
Template Sequence		P	M	E	R	T	V	R	V	T	G	M	T	C	A	M	C	V	K	S	I	E	T	A	V	G	S	L	E	G	V	E	E	V	R	V	N	L	A	T	E	T	A	F	I	R	F	D	E	K	R	I	D	F	E	T	I	K	R	V	I	E	D	L	G	Y	G	V	V	D	E	Q	A	A	V	S	A	E	V	E	H
Template Known Secondary structure											T			S													T	S	T	T								T	T	T	T								T	T	T																		S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		A	S	R	L	K	E	N	L	P	L	I	T	L	I	V	M	M	A	I	S	W	G	L	E	Q	F	N	H	.	.	.	P	F	G	Q	L	A	F	I	A	T	T	L	V	G	L	Y	P	I	A	R	Q	A	L	R	L	I	K	S	G	S	Y	F	A	I	E	T	L	M	S	V	A	A	I	G	A	L	F	I	G
Query Conservation																														.	.	.
Alig confidence																														.	.	.																															.
Template Conservation																																																															.
Template Sequence		L	S	R	M	K	R	K	L	Y	V	A	A	F	A	G	V	L	L	L	F	L	A	H	F	I	S	L	P	Y	E	D	F	V	Q	L	L	I	A	L	P	A	I	F	Y	S	G	S	S	I	F	K	A	A	F	S	A	L	R	R	R	T	.	L	N	M	D	V	M	Y	S	M	G	V	G	A	A	F	L	A	S
Template Known Secondary structure					S				S	S	S	T	T	T	T								T	T	S	S		S	S	S	S			S			S	T																T			T	T	T	T		S	.	T	T	S		S	S		S
Template Predicted Secondary structure																																																															.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
															199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	A	E	A	A	M	V	L	L	L	F	L	I	G	E	R	L	E	G	W	A	A	S	R	A	R	Q	G	V	S	A	L	M	A	L	K	P	E	T	A	T	R	L	R	K	G	E	R	E	E	V	A	I	N	S	L	R	P	G	D	V	I	E	V	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	S	T	A	G	V	L	P	R	E	Y	S	F	Y	E	T	S	V	L	L	L	A	F	L	L	L	G	R	T	L	E	A	R	A	K	S	R	T	G	E	A	I	K	K	L	V	G	L	Q	A	K	T	A	V	V	I	R	D	G	K	E	I	A	V	P	V	E	E	V	A	V	G	D	I	V	I	V	R	P
Template Known Secondary structure							T	T	T	T							T	T																				T	T				T	T						T	S		S							T	T							G	G	G			T	T							T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	R	L	P	A	D	G	K	L	L	S	P	F	A	S	F	D	E	S	A	L	T	G	E	S	I	P	V	E	R	A	T	G	D	K	V	P	A	G	A	T	S	V	D	R	L	V	T	L	E	V	L	S	E	P	G	A	S	A	I	D	R	I	L	K	L	I	E	E	A	E	E	R	R	A	P	I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	K	I	P	V	D	G	V	V	V	E	G	E	S	Y	V	D	E	S	M	I	S	G	E	P	V	P	V	L	K	S	K	G	D	E	V	F	G	A	T	I	N	N	T	G	V	L	K	I	R	A	T	R	V	G	G	E	T	L	L	A	Q	I	V	K	L	V	E	D	A	M	G	S	K	P	P	I	Q	R
Template Known Secondary structure		T		B			S																				S	S						T	T					T	T					S	S										G	G	G	S										S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	D	R	F	S	R	I	Y	T	P	A	I	M	A	V	A	L	L	V	T	L	V	P	P	L	L	F	A	A	S	W	Q	E	W	I	Y	K	G	L	T	L	L	L	I	G	C	P	C	A	L	V	I	S	T	P	A	A	I	T	S	G	L	A	A	A	A	R	R	G	A	L	I	K	G	G	A	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	K	V	V	A	Y	F	I	P	T	V	L	L	V	A	I	S	A	F	I	Y	W	Y	F	I	A	H	A	P	L	L	F	A	F	T	T	L	I	A	V	L	V	V	A	C	P	C	A	F	G	L	A	T	P	T	A	L	T	V	G	M	G	K	G	A	E	L	G	I	L	I	K	N	A	D	A	L	E
Template Known Secondary structure																							T	T	S		S	S	T	T		T	T			S												S		T	T																		T	T	T				S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	G	R	V	T	Q	V	A	F	D	K	T	G	T	L	T	V	G	K	P	R	V	T	A	I	H	P	A	T	G	I	S	E	S	E	L	L	T	L	A	A	A	V	E	Q	G	A	T	H	P	L	A	Q	A	I	V	R	E	A	Q	V	A	E	L	A	I	P	T	A	E	S	Q	R	A	L	V	G	S	G
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		V	A	E	K	V	T	A	V	I	F	D	K	T	G	T	L	T	K	G	K	P	E	V	T	D	L	V	P	L	N	G	.	D	E	R	E	L	L	R	L	A	A	I	A	E	R	R	S	E	H	P	I	A	E	A	I	V	K	K	A	L	E	H	G	I	E	L	G	E	P	E	K	V	E	V	I	A	G	E	G
Template Known Secondary structure			G	G	G												T	S		S										S	S	S	.														T	T			S													T	T					S								T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		506	.	.			.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		I	E	A	.	.	Q	V	N	G	E	R	V	L	I	C	A	A	G	K	H	P	A	D	A	F	T	G	L	I	N	E	L	E	S	A	G	Q	T	V	V	L	V	V	R	N	D	D	V	L	G	V	I	A	L	Q	D	T	L	R	A	D	A	A	T	A	I	S	E	L	N	A	L	G	V	K	G	V	I	L	T
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		V	V	A	D	G	I	L	V	G	N	K	R	L	M	E	D	F	G	V	A	V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	N	G	R	V	E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	M	G	I	K	V	G	M	I	T
Template Known Secondary structure					T	T												T	T																T	T	T									T	T												S		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	D	N	P	R	A	A	A	A	I	A	G	E	L	G	L	.	E	F	K	A	G	L	L	P	E	D	K	V	K	A	V	T	E	L	N	Q	H	A	P	L	A	M	V	G	D	G	I	N	D	A	P	A	M	K	A	A	A	I	G	I	A	M	G	S	G	T	D	V	A	L	E	T	A	D	A	A	L	T	H
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	A	K	E	V	V	A	F	V	G	D	G	I	N	D	A	P	A	L	A	Q	A	D	L	G	I	A	V	G	S	G	S	D	V	A	V	E	S	G	D	I	V	L	I	R
Template Known Secondary structure		S	S													T		S					S			T	T										T	T	T									S	S	T	T							S	S									S			S	S			S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.								.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		N	H	L	R	G	L	V	Q	M	I	E	L	A	R	A	T	H	A	N	I	R	Q	N	I	T	I	A	L	G	L	K	G	I	F	L	V	T	T	L	L	G	M	.	.	.	.	.	.	.	T	G	L	W	L	A	V	L	A	D	T	G	A	T	V	L	V	T	A	N	A	L	R	L	L	R	R	R
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	L	R	D	V	V	A	A	I	Q	L	S	R	K	T	M	S	K	I	K	Q	N	I	F	W	A	L	I	Y	N	V	I	L	I	P	A	A	A	G	L	L	Y	P	I	F	G	V	V	F	R	P	E	F	A	G	L	A	M	A	M	S	S	V	S	V	V	A	N	S	L	L	L	R	N	Y	V
Template Known Secondary structure				T	T																																					T	T	S	S					S												T									T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.