Job Description P37617 Confidence 99.43% Date Thu Jan 5 11:55:52 GMT 2012
Rank 37 Aligned Residues 126
% Identity 20% Template c3e8mD_
PDB info
PDB header: transferaseChain: D: PDB Molecule: acylneuraminate cytidylyltransferase;
PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily
Resolution 1.10 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
560 . . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . .
620 .
. . . . . . . . 630 . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
T L R A D A A T A I S E L N A L G V K G V I L T G D N P R A A A A I A G E L G L E F K A G L L P E D K V K A V T E L N Q .
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H A .
P L A M V G D G I N D A P
Query Conservation  
                                                              . . . .   .    
Alig confidence  
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Template Conservation  
                                                                    .                                          
Template Sequence  
K F N T S D S A G I F W A H N K G I P V G I L T G E K T E I V R R R A E K L K V D Y L F .
Q G V V D K L S A A E E L C N E L G I N L E Q V A Y I G D D L N D A K
Template Known Secondary structure  
G G G T T S T T S . S S T G G G S G G G
Template Predicted Secondary structure  
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Template SS confidence  
   
31 . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . .
. . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . .
 
   
635 . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
A M K A A A I G I A M G S G T D V A L E T A D A A L T H N H L R G L V Q M I E L A R A T H A N I R Q N I T I A L G
Query Conservation  
                                                       
Alig confidence  
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Template Conservation  
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Template Sequence  
L L K R V G I A G V P A S A P F Y I R R L S T I F L E K R G G E G V F R E F .
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V E K V L G I N L E D F I A
Template Known Secondary structure  
T T S S T T S T T S S T T T T . . . . . T
Template Predicted Secondary structure  
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Template SS confidence  
   
110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . .
. . 150 . . . . . . . . . 160 .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]