Job Description P37617 Confidence 99.02% Date Thu Jan 5 11:55:52 GMT 2012 Rank 80 Aligned Residues 129 % Identity 20% Template c3dnpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:stress response protein yhax; PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis Resolution 1.85 Å

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		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	V	L	V	V	R	N	D	D	V	L	G	V	I	A	L	Q	D	T	L	R	A	D	A	A	T	A	I	S	E	L	N	A	L	G	V	K	G	V	I	L	T	G	D	N	P	R	A	A	A	A	I	A	G	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		K	Q	L	L	A	L	N	I	D	G	A	L	L	R	S	.	.	.	N	G	K	I	H	Q	A	T	K	D	A	I	E	Y	V	K	K	K	G	I	Y	V	T	L	V	T	N	R	H	F	R	S	A	Q	K	I	A	K	S	L	K	L	D	A	K	L	I	T	H	S	G	A	Y	I	A	E	K	I	D	A	P	F
Template Known Secondary structure														S		T	.	.	.	T	S																T	T						B		S	S												T	T			S					G	G	G	T				S	S	T	T	S		S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	K	R	I	S	D	D	H	T	F	N	I	V	Q	V	L	E	S	Y	Q	C	N	I	R	L	L	H	E	K	Y	S	I	G	N	K	K	K	V	N	S	N	L	L	G	K	A	L	I	H	P	S	D	P	I	F	Y	P	V	Q	F	V	E	S	L	S	D	L	L	X	D	E	P	V	S	A	P	V	I	E
Template Known Secondary structure																				T	S	S								S	S																	S						B	T	T	T	B						S									S					S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
																																	599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.						.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	F	K	A	G	L	L	P	E	D	K	V	K	A	V	T	E	L	N	Q	H	A	P	.	.	.	.	.	L	A	M	V	G	D	G	I	N	D	A	P	A	M	K	A	A	A	I	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.														.	.	.	.	.
Template Conservation																																										.	.
Template Sequence		V	Y	T	E	H	D	I	Q	H	D	I	T	E	T	I	T	K	A	F	P	A	V	D	V	I	R	V	N	D	E	K	L	N	I	V	P	K	G	V	S	.	.	K	E	A	G	L	A	L	V	A	S	E	L	G	L	S	X	D	D	V	V	A	I	G	H	Q	Y	D	D	L	P	X	I	E	L	A	G	L	G
Template Known Secondary structure						G	G	G													T	T								T	T							T	T			.	.												T	T			G	G	G							S	G	G	G							S	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	M	G	S	G	T	D	V	A	L	E	T	A	D	A	A	L	T	H	N	H	L	R	G	L	V	Q	M	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	X	G	N	A	V	P	E	I	K	R	K	A	D	W	V	T	R	S	N	D	E	Q	G	V	A	Y	X	X	K
Template Known Secondary structure					T	T	S								S	S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions