 |
Job Description | P37617 | Confidence | 24.79% | Date | Thu Jan 5 11:55:52 GMT 2012 |
Rank | 377 | Aligned Residues | 30 |
% Identity | 30% | Template | c3d0fA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca; |
PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718
|
Resolution | 1.64 Å |
|
  |   |
236 | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | T | A | T | R | L | . |
R | K | G | E | R | E | E | V | A | I | N | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | P | G | D | V | I | E | V | A | A |
Query Conservation |   |
|   |   |
|   |
|   | . |
|   |
|   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|   |   |
Template Sequence |   |
P | G | A | V | E | A | F | R | K | N | G | E | T | I | R | I | T | G | D | G | L | K | A | A | H | R | F | L | S | N | D | P | K | I | G | E | K | R | I | R | P | G | A | L | I | R | V | K | K |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  | T | T | S |
|  |  |  |  |
| G | G | G | G | S | T | T | G | G | G | T | T | T |
| T | T | T | G | G | G | S |
|
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|