Job Description P37617 Confidence 100.00% Date Thu Jan 5 11:55:52 GMT 2012 Rank 5 Aligned Residues 533 % Identity 26% Template c2zxeA_ PDB info PDB header:hydrolase/transport protein Chain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state Resolution 2.40 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.														.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	L	I	K	S	G	S	Y	F	A	I	E	T	L	M	S	V	A	A	I	G	A	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	T	A	E	A	A	M	V	L	L	L	F	L	I	G	E	R	L	E	G	W	A	A	S	R	A	R	Q	G	V	S	A	L	M	A	L	K	P	E	T
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	I	K	F	C	R	Q	L	F	G	G	F	S	I	L	L	W	I	G	A	I	L	C	F	L	A	Y	G	I	Q	A	A	T	E	D	E	P	A	N	D	N	L	Y	L	G	V	V	L	S	T	V	V	I	V	T	G	C	F	S	Y	Y	Q	E	A	K	S	S	R	I	M	D	S	F	K	N	M	V	P	Q	Q
Template Known Secondary structure							T	T	T	T	S	T																						S	S																													T												T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.
Predicted Secondary structure																																											.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	L	R	K	G	E	R	E	E	V	A	I	N	S	L	R	P	G	D	V	I	E	V	A	A	G	G	R	L	P	A	D	G	K	L	L	S	P	F	.	A	S	F	D	E	S	A	L	T	G	E	S	I	P	V	E	R	A	T	G	D	K	.	.	.	.	.	.	.	.	.	.	V	P	A	G	A	T
Query Conservation																																											.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	V	I	R	D	G	E	K	S	T	I	N	A	E	F	V	V	A	G	D	L	V	E	V	K	G	G	D	R	I	P	A	D	L	R	I	I	S	A	H	G	C	K	V	D	N	S	S	L	T	G	E	S	E	P	Q	T	R	S	P	E	F	S	S	E	N	P	L	E	T	R	N	I	A	F	F	S	T	N
Template Known Secondary structure							T	T							G	G	G			T	T							T	T		B			S																			S			S						S	S				S	S	T	T	T		S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	R	L	V	T	L	E	V	L	S	E	P	G	A	S	A	I	D	R	I	L	K	L	I	E	E	A	E	E	R	R	A	P	I	E	R	F	I	D	R	F	S	R	I	Y	T	P	A	I	M	A	V	A	L	L	V	T	L	V	P	P	L	L	F	A	A	S	W	Q	E	W	I	Y	K	G	L	T	L
Query Conservation
Alig confidence																																																																			.
Template Conservation																																																																			.
Template Sequence		C	V	E	G	T	A	R	G	V	V	V	Y	T	G	D	R	T	V	M	G	R	I	A	T	L	A	S	G	L	E	V	G	R	T	P	I	A	I	E	I	E	H	F	I	H	I	I	T	G	V	A	V	F	L	G	V	S	F	F	I	L	S	L	I	L	.	G	Y	S	W	L	E	A	V	I	F	L	I	G	I
Template Known Secondary structure															G	G	G	S												S																																				T	.	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	I	G	C	P	C	A	L	V	I	S	T	P	A	A	I	T	S	G	L	A	A	A	A	R	R	G	A	L	I	K	G	G	A	A	L	E	Q	L	G	R	V	T	Q	V	A	F	D	K	T	G	T	L	T	V	G	K	P	R	V	T	A	I	H	P	A	T	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	A	N	V	P	E	G	L	L	A	T	V	T	V	C	L	T	L	T	A	K	R	M	A	R	K	N	C	L	V	K	N	L	E	A	V	E	T	L	G	S	T	S	T	I	C	S	D	K	T	G	T	L	T	Q	N	R	M	T	V	A	H	M	W	F	D	N	Q	I	H	E	A	D	T	T	E	N	Q	S
Template Known Secondary structure						S		T	T																		T	T	T				S	S	T	T																				B		S	S									T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
									457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.																		.	.	.	.	.	480	.	.	.	.	.	.	.																.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	S	E	S	E	L	L	T	L	A	A	A	V	E	Q	G	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	L	A	Q	A	I	V	R	E	A	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	L	A	I	P	T	A	E	S
Query Conservation		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	A	F	D	K	T	S	A	T	W	S	A	L	S	R	I	A	A	L	C	N	R	A	V	F	Q	A	G	Q	D	N	V	P	I	L	K	R	S	V	A	G	D	A	S	E	S	A	L	L	K	C	I	E	L	C	C	G	S	V	Q	G	M	R	D	R	N	P	K	I	V	E	I	P	F	N	S	T	N	K
Template Known Secondary structure		S					S	S														S							T	T		T	T	S		G	G	G	S				S																S									S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		498	.	500	.	.	.	.								.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.														.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	A	L	V	G	S	.	.	.	.	.	.	.	G	I	E	A	Q	V	N	G	E	R	V	L	I	C	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	P	A	D	A	F	T	G	L	I	N	E	L	E	S	A	G	Q	T	V	V	L	V	V	R	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	L	S	I	H	E	N	E	K	S	S	E	S	R	Y	L	L	V	M	K	G	A	P	E	R	I	L	D	R	C	S	T	I	L	L	N	G	A	E	E	P	L	K	E	D	M	K	E	A	F	Q	N	A	Y	L	E	L	G	G	L	G	E	R	V	L	G	F	C	H	F	A	L	P	E	D	K	Y	N	E
Template Known Secondary structure										S		T	T	T																T	T						B	T	T	B			B																			T	T													S	T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
																548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	D	V	L	G	V	I	A	L	Q	D	T	L	R	A	D	A	A	T	A	I	S	E	L	N	A	L	G	V	K	G	V	I	L	T	G	D	N	P	R	A	A	A	A	I	A	G	E	L	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	P	F	D	A	D	E	P	N	F	P	T	T	D	L	C	F	V	G	L	M	A	M	I	D	P	P	R	A	A	V	P	D	A	V	G	K	C	R	S	A	G	I	K	V	I	M	V	T	G	D	H	P	I	T	A	K	A	I	A	K	G	V	G	I	I	S	E	G	N	E	T	I	E	D	I	A	A	R
Template Known Secondary structure		T					T	T	T	T		S			S	S													B		T	T											T	T								S	S													T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
																																											601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.		.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	A	G	L	L	P	E	D	K	V	K	A	V	T	E	L	N	Q	H	A	.	P	L	A	M	V	G	D	G	I	N	D	A	P	A	M	K	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		L	N	I	P	I	G	Q	V	N	P	R	D	A	K	A	C	V	V	H	G	S	D	L	K	D	L	S	T	E	V	L	D	D	I	L	H	Y	H	T	E	I	V	F	A	R	T	S	P	Q	Q	K	L	I	I	V	E	G	C	Q	R	Q	G	A	I	V	A	V	T	G	D	G	V	N	D	S	P	A	L	K	K
Template Known Secondary structure		T	T			G	G	G	S		G	G	G												T	T														S						S																T	T									S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
		639	640	.	.	.	.	.	.		.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	A	I	G	I	A	M	G	.	S	G	T	D	V	A	L	E	T	A	D	A	A	L	T	H	N	H	L	R	G	L	V	Q	M	I	E	L	A	R	A	T	H	A	N	I	R	Q	N	I	T	I	A	L	G	L	K	G	I	F	L	V	T	T	L	L	G	M	T
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		A	D	I	G	V	A	M	G	I	S	G	S	D	V	S	K	Q	A	A	D	M	I	L	L	D	D	N	F	A	S	I	V	T	G	V	E	E	G	R	L	I	F	D	N	L	K	K	S	I	A	Y	T	L	T	S	N	I	P	E	I	T	P	F	L	V	F	I	I
Template Known Secondary structure		S	S						S	S	S										S				T	T			T																											T	T
Template Predicted Secondary structure
Template SS confidence
		728	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.