Job Description P37617 Confidence 38.00% Date Thu Jan 5 11:55:52 GMT 2012 Rank 300 Aligned Residues 61 % Identity 15% Template c2j4dA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:cryptochrome dash; PDBTitle: cryptochrome 3 from arabidopsis thaliana Resolution 1.9 Å

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		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.		600	.	.	.	.	.	.	.						.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																																									.									.	.	.	.	.
Query SS confidence																																									.									.	.	.	.	.
Query Sequence		L	R	A	D	A	A	T	A	I	S	E	L	N	A	L	G	V	K	G	V	I	L	T	G	D	N	P	R	A	A	A	A	I	A	G	E	L	G	L	.	E	F	K	A	G	L	L	P	.	.	.	.	.	E	D	K	V	K	A	V	T	E	L	N	Q	H	A
Query Conservation																																									.									.	.	.	.	.
Alig confidence																																									.									.	.	.	.	.
Template Conservation
Template Sequence		L	M	E	C	L	V	D	L	R	K	N	L	M	K	R	G	L	N	L	L	I	R	S	G	K	P	E	E	I	L	P	S	L	A	K	D	F	G	A	R	T	V	F	A	H	K	E	T	C	S	E	E	V	D	V	E	R	L	V	N	Q	G	L	K	R	V	G
Template Known Secondary structure																T	T								S														T		S									S																T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions