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Job DescriptionP37617
Confidence100.00%DateThu Jan 5 11:55:52 GMT 2012
Rank11Aligned Residues241
% Identity32%Templatec2iyeC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:copper-transporting atpase; PDBTitle: structure of catalytic cpx-atpase domain copb-b
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   408.410.........420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  LAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQAIVREAQV
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Template Sequence  YEKMLHKGMIIKNSNVYEKIKEIDTIIFDKTGTLTYGTPIVTQFI. . . . . GDSLSLAYAASVEALSSHPIAKAIVKYAKE
Template Known Secondary structure  TTT

SSSTT

STTTT.....S
TT

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   388.390.........400.........410.........420.........430.. .......440.........450.........460..
 
   488.490.........500.........510.........520.........530.........540.........550.........560.......
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Query Sequence  AELAIPTAESQRALVGSGIEAQVNGERVLICAAGKHPADAFTGLINELESAGQTVVLVVRNDDVLGVIALQDTLRADAAT
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Template Sequence  QGVKILEVKDFKEISGIGVRGKISDKIIEVKKAED. . . . . . . . . . . . . . . . . . . . IAVYINGEPIASFNISDVPRPNLKD
Template Known Secondary structure  TT





TTTTT



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   463......470.........480.........490....... ..500.........510.........520..
 
   568.570.........580.........590......... 600.........610.........620. ........630.........640.....
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Query Sequence  AISELNALGVKGVILTGDNPRAAAAIAGELGL. EFKAGLLPEDKVKAVTELNQHA. PLAMVGDGINDAPAMKAAAIGIAM
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Template Sequence  YLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAM
Template Known Secondary structure  GGG

SS
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S

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TT


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   526...530.........540.........550.........560.........570.........580.........590.........600.....
 
   646...650.........660.........670...
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Query Sequence  GSGTDVALETADAALTHNHLRGLVQMIE
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Template Sequence  GNGVDISKNVADIILVSNDIGTLLGLIK
Template Known Secondary structure  STTT
STT

SSTT

T
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   606...610.........620.........630...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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