Return to main results Retrieve Phyre Job Id

Job DescriptionP37617
Confidence30.62%DateThu Jan 5 11:55:52 GMT 2012
Rank340Aligned Residues106
% Identity20%Templatec1bmtB_
PDB info PDB header:methyltransferaseChain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   511........520.........530.........540....... ..550.........560.........570......
Predicted Secondary structure 











..............










Query SS confidence 




































. . . . . . . . . . . . . .




























Query Sequence  NGERVLICAAGKHPADAFTGLINELESAGQTVVLVVR. . . . . . . . . . . . . . NDDVLGVIALQDTLRADAATAISELNALG
Query Conservation   
    

                    
   
 

 ..............     
 
 
 
 

  
   
  

  
Alig confidence 




































..............




























Template Conservation   
 


 

 

 



  

   
   
  
  

  

 
  
        
 



 
           
  
   
Template Sequence  NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQG
Template Known Secondary structure  S

TT



TTS


SS

T
S

STT
Template Predicted Secondary structure 


























Template SS confidence 















































































   746...750.........760.........770.........780.........790.........800.........810.........820.....
 
   577..580.........590..... ....600.........610.......
Predicted Secondary structure 




.....





Query SS confidence 


















. . . . .





















Query Sequence  VKGVILTGDNPRAAAAIAG. . . . . ELGLEFKAGLLPEDKVKAVTEL
Query Conservation 
 
 




   

  

 ..... 


 
 
   

 
   
  
Alig confidence 


















.....








.











Template Conservation      
 



                


    .

  

     
Template Sequence  FTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQ. NASRTVGVVAAL
Template Known Secondary structure 

S
STT

TTGGG
SS


.S
Template Predicted Secondary structure 













.
Template SS confidence 













































   826...830.........840.........850........ .860.........870
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions