 |
Job Description | P75830 | Confidence | 19.37% | Date | Thu Jan 5 12:14:47 GMT 2012 |
Rank | 97 | Aligned Residues | 52 |
% Identity | 13% | Template | c2v90E_ |
PDB info |
PDB header:protein-binding | Chain: E: PDB Molecule:pdz domain-containing protein 3; |
PDBTitle: crystal structure of the 3rd pdz domain of intestine- and2 kidney-enriched pdz domain ikepp (pdzd3)
|
Resolution | 2.00 Å |
|
  |   |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | S | A | L | G | D | P | V | G | D | N | R | Y | K | V | K | L | L | R | N | G | E | T | R | E | R | E | V | T | I | G | A | R | N | D | T | D | V | E | I | V | K | G | L | E | A | G | D | E | V | V |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
Template Sequence |   |
P | R | C | L | H | L | E | K | G | P | Q | G | F | G | F | L | L | R | E | E | K | G | L | D | G | R | P | G | Q | F | L | W | E | V | D | P | G | L | P | A | K | K | A | G | M | Q | A | G | D | R | L | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| B | T | T | B | S |
|  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  | T | T |
|
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|