 |
Job Description | P77398 | Confidence | 97.98% | Date | Thu Jan 5 12:28:36 GMT 2012 |
Rank | 335 | Aligned Residues | 115 |
% Identity | 16% | Template | d7mdha1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.40 |
|
 |
  |   |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 350 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | T | A | R | R | R | T | R | V | L | I | L | G | V | N | G | F | I | G | N | H | L | T | E | R | L | L | R | E | D | H | Y | . |
. |
. |
. |
. |
. |
E | V | Y | G | L | D | I | G | S | D | A | I | S | . |
. |
. |
. |
. |
. |
. |
. |
R | F | L | N | H | P | H | F | H | F | V | E | G | D | I | S | I | H | S | E | W |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |
| . | . | . | . | . | . |   |
|   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
| . | . |
Template Sequence |   |
C | T | W | K | K | L | V | N | I | A | V | S | G | A | A | G | M | I | S | N | H | L | L | F | K | L | A | S | G | E | V | F | G | Q | D | Q | P | I | A | L | K | L | L | G | S | E | R | S | F | Q | A | L | E | G | V | A | M | E | L | E | D | S | L | Y | P | L | L | R | E | V | S | I | G | I | D | P | Y | E | . |
. |
Template Known Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
| T | T |
|
|  |  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | T |  |  |  |  |  |  |  | S |
|  |  |  | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
  |
  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | |
|
|
. | . | . | . | . | 430 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
I | E | Y | H | V | K | K | C | D | V | V | L | P | L | V | A | I | A | T | P | I | E | Y | T | R | N | P | L | R | V | F | E | L | D | F | E | E | N | L | R | I | I | R | Y | C | V | K | Y | R | . |
. |
. |
K | R | I | I | F | P | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |   | . | . | . |   |
|
|
|   |   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
| . | . |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
V | F | E | D | V | D | W | A | L | L | I | G | A | K | P | R | G | P | G | . |
. |
M | E | R | A | A | L | L | D | I | N | G | Q | I | F | A | D | Q | G | K | A | L | N | A | V | A | S | K | N | V | K | V | L | V | V | G |
Template Known Secondary structure |   |
. | . | . |  | T | T | T |
| S |  |  |  |  |
|
|
|
|
|
|
| T | T | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |
| S |
Template Predicted Secondary structure |   |
. | . | . |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|