Return to main results Retrieve Phyre Job Id

Job DescriptionP77398
Confidence97.93%DateThu Jan 5 12:28:36 GMT 2012
Rank336Aligned Residues109
% Identity17%Templated1t2da1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.....320.........330.........340.........350.........360.........370....... ..380..
Predicted Secondary structure 

























...........

Query SS confidence 































































. . . . . . . . . . .




Query Sequence  RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE. . . . . . . . . . . YHVKK
Query Conservation    













 

  

  
 
 
  
 
                
  

        ...........     
Alig confidence 









.

































.........









...........




Template Conservation 

 

 



.
 

  

  

  
   
 
 
           .........                      

  
Template Sequence  PKAKIVLVGS. GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKAL. . . . . . . . . DTSHTNVMAYSNCKVSGSNTYDDLAG
Template Known Secondary structure 




.STT


SSSS.........TT





GGGGTT
Template Predicted Secondary structure 




.







.........








Template SS confidence 















































































   2.......10. ........20.........30.........40..... ....50.........60.........70.
 
   383......390...... ...400.........410.........420.... .....430..
Predicted Secondary structure 







...


.



Query SS confidence 













. . .



























.







Query Sequence  CDVVLPLVAIATPI. . . EYTRNPLRVFELDFEENLRIIRYCVKYR. KRIIFPST
Query Conservation   
 





     ...            

 

 




     . 


  

Alig confidence 













...



























.







Template Conservation 





                       
  
   
   
        


 
Template Sequence  ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT
Template Known Secondary structure 
S

S
SS
TT

STT

GGGG
TTS
S
Template Predicted Secondary structure 




















Template SS confidence 





















































   72.......80.........90.........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions