 |
Job Description | P77398 | Confidence | 97.93% | Date | Thu Jan 5 12:28:36 GMT 2012 |
Rank | 336 | Aligned Residues | 109 |
% Identity | 17% | Template | d1t2da1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 1.10 |
|
 |
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 380 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
R | R | T | R | V | L | I | L | G | V | N | G | F | I | G | N | H | L | T | E | R | L | L | R | E | D | H | Y | E | V | Y | G | L | D | I | G | S | D | A | I | S | R | F | L | N | H | P | H | F | H | F | V | E | G | D | I | S | I | H | S | E | W | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | H | V | K | K |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|
|
| . |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
P | K | A | K | I | V | L | V | G | S | . |
G | M | I | G | G | V | M | A | T | L | I | V | Q | K | N | L | G | D | V | V | L | F | D | I | V | K | N | M | P | H | G | K | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | T | S | H | T | N | V | M | A | Y | S | N | C | K | V | S | G | S | N | T | Y | D | D | L | A | G |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  | T |  |  |  |  |  | T |
|
|
|
|  |  |  |  |
|
| G | G | G | G | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
383 | . | . | . | . | . | . | 390 | . | . | . | . | . | . | |
|
|
. | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | |
. | . | . | . | . | 430 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|  |  | . | . | . |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
C | D | V | V | L | P | L | V | A | I | A | T | P | I | . |
. |
. |
E | Y | T | R | N | P | L | R | V | F | E | L | D | F | E | E | N | L | R | I | I | R | Y | C | V | K | Y | R | . |
K | R | I | I | F | P | S | T |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |   | . |   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
A | D | V | V | I | V | T | A | G | F | T | K | A | P | G | K | S | D | K | E | W | N | R | D | D | L | L | P | L | N | N | K | I | M | I | E | I | G | G | H | I | K | K | N | C | P | N | A | F | I | I | V | V | T |
Template Known Secondary structure |   |
| S |  |  |  |  |
|
| S |
| S | S |
| T | T |
|
| S | T | T |
|
| G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|