Phyre 2 alignment of P77398 with d1sb8a

Job Description P77398
Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012

Rank 42 Aligned Residues 313

% Identity 23% Template d1sb8a_

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 2.10

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.											360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.
Query Sequence	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	.	.	.	.	.	.	.	.	.	.	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C
Query Conservation																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																				.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																											.																																																.
Template Sequence	Q	P	K	V	W	L	I	T	G	V	A	G	F	I	G	S	N	L	L	E	T	L	L	K	L	D	.	Q	K	V	V	G	L	D	N	F	A	T	G	H	Q	R	N	L	D	E	V	R	S	L	V	S	E	K	Q	W	S	N	F	K	F	I	Q	G	D	I	R	N	L	D	D	C	N	N	.	A	C	A	G	V
Template Known Secondary structure	S								T	T	T	S													T	T	.										S	S													S						T	T								T	T	S							.			T	T
Template Predicted Secondary structure																											.																																																.
Template SS confidence
	15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.

	384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I
Query Conservation																																										.
Alig confidence																																										.																											.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.
Template Sequence	D	Y	V	L	H	Q	A	A	L	G	S	V	P	R	S	I	N	D	P	I	T	S	N	A	T	N	I	D	G	F	L	N	M	L	I	A	A	R	D	A	K	V	Q	S	F	T	Y	A	A	S	S	S	T	Y	G	D	H	P	G	L	P	K	V	E	D	T	I	G	.	.	.	.	.	.	.	K	P	L	S	P
Template Known Secondary structure	S							S																			T													T	T		S								G	G	G	G	T	T				S	S	B		T	T				.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Template SS confidence
	93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.

	463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence	Y	A	V	T	K	Y	V	N	E	L	Y	A	D	V	F	S	R	C	Y	G	F	S	T	I	G	L	R	Y	F	N	V	F	G	R	R	Q	D	P	N	G	.	.	.	.	A	Y	A	A	V	I	P	K	W	T	S	S	M	I	Q	G	D	D	V	Y	I	N	G	D	G	E	T	S	R	D	F	C	Y	I	E	N
Template Known Secondary structure																																		T	T					S	.	.	.	.	T	T														T							S	S	S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
	166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

	543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S
Query Conservation
Alig confidence														.															.																										.	.	.	.	.	.	.	.	.	.
Template Conservation														.															.																										.	.	.	.	.	.	.	.	.	.
Template Sequence	T	V	Q	A	N	L	L	A	A	T	A	G	L	.	D	A	R	N	Q	V	Y	N	I	A	V	G	G	R	.	T	S	L	N	Q	L	F	F	A	L	R	D	G	L	A	E	N	G	V	S	Y	H	R	E	P	.	.	.	.	.	.	.	.	.	.	V	Y	R	D	F	R	E	G	D	V	R	H	S	L	A	D
Template Known Secondary structure										T			G	.	G	G		S						S		S			.																	T	T								.	.	.	.	.	.	.	.	.	.							T	T			S	B			B
Template Predicted Secondary structure														.															.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
	242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.											.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

	623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	R	N	A	H	R	C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	S	K	A	A	K	L	L	G	Y	A	P	K	Y	D	V	S	A	G	V	A	L	A	M	P	W	Y	I	M
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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