Phyre 2 alignment of P77398 with d1r6da

Job Description P77398
Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012

Rank 43 Aligned Residues 302

% Identity 23% Template d1r6da_

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 1.35

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.												.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	.	.	.	.	.	.	.	.	.	.	.	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.									.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																									.																																																	.
Template Sequence	M	R	L	L	V	T	G	G	A	G	F	I	G	S	H	F	V	R	Q	L	L	A	G	A	.	Y	P	D	V	P	A	D	E	V	I	V	L	D	S	L	T	Y	A	G	N	R	A	N	L	A	P	V	D	A	D	P	R	L	R	F	V	H	G	D	I	R	D	A	G	L	L	A	R	.	E	L	R	G	V	D
Template Known Secondary structure							T	T	T	S													T	S	.		T	T	S			S										T	T			G	G	G	G	G	G	G	T	T		T	T								T	T								.		T	T	T
Template Predicted Secondary structure																									.																																																	.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.

	385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y
Query Conservation																																									.
Alig confidence																																									.																											.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.
Template Sequence	A	I	V	H	F	A	A	E	S	H	V	D	R	S	I	A	G	A	S	V	F	T	E	T	N	V	Q	G	T	Q	T	L	L	Q	C	A	V	D	A	G	V	G	R	V	V	H	V	S	T	N	Q	V	Y	G	S	I	D	S	G	S	W	T	E	S	S	P	L	.	.	.	.	.	.	.	E	P	N	S	P	Y
Template Known Secondary structure							S																			T													T	T										G	G	G	G				S	S	S		B		T	T	S			.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.

	464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence	A	A	S	K	A	G	S	D	L	V	A	R	A	Y	H	R	T	Y	G	L	D	V	R	I	T	R	C	C	N	N	Y	G	P	Y	Q	H	P	E	K	.	.	.	.	.	.	.	.	L	I	P	L	F	V	T	N	L	L	D	G	G	T	L	P	L	Y	G	D	G	A	N	V	R	E	W	V	H	T	D	D	H
Template Known Secondary structure																																	T	T			T	T	S	.	.	.	.	.	.	.	.											T	T							T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

	544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I
Query Conservation
Alig confidence														.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	C	R	G	I	A	L	V	L	A	G	G	R	A	.	.	.	G	E	I	Y	H	I	G	G	G	L	.	E	L	T	N	R	E	L	T	G	I	L	L	D	S	L	G	A	D	W	S	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	V	A	D	R	K	G	H	D	L	R	Y	S	L	D	G
Template Known Secondary structure													T	.	.	.	T										.																T			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T				B			B
Template Predicted Secondary structure														.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	224	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.															.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

	624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	N	A	H	R	C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence	G	K	I	E	R	E	L	G	Y	R	P	Q	V	S	F	A	D	G	L	A	R	T	V	R	W	Y	R	E	N
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
	286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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