Phyre 2 alignment of P77398 with d1oc2a

Job Description P77398
Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012

Rank 22 Aligned Residues 311

% Identity 20% Template d1oc2a_

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 1.5

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	.	.	.	.	.	.	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L
Query Conservation																																										.	.	.	.	.	.
Alig confidence																											.															.	.	.	.	.	.																								.
Template Conservation																											.																																												.
Template Sequence	Q	F	K	N	I	I	V	T	G	G	A	G	F	I	G	S	N	F	V	H	Y	V	Y	N	N	H	.	P	D	V	H	V	T	V	L	D	K	L	T	Y	A	G	N	K	A	N	L	E	A	I	L	G	D	R	V	E	L	V	V	G	D	I	A	D	A	E	L	V	D	K	.	L	A	A	K	A	D	A	I	V
Template Known Secondary structure			S						T	T	T	S															.	T	T											T	T			G	G	G	T	G	G	G		S	S	S								T	T								.			T	T		S
Template Predicted Secondary structure																											.																																												.
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80

	388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.						.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	.	.	.	.	.	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I
Query Conservation																																																											.	.	.	.	.
Alig confidence																																																											.	.	.	.	.
Template Conservation
Template Sequence	H	Y	A	A	E	S	H	N	D	N	S	L	N	D	P	S	P	F	I	H	T	N	F	I	G	T	Y	T	L	L	E	A	A	R	K	Y	D	I	R	F	H	H	V	S	T	D	E	V	Y	G	D	L	P	L	R	E	D	L	P	G	H	G	E	G	P	G	E	K	F	T	A	E	T	N	Y	N	P	S	S	P
Template Known Secondary structure				S																			T														T									G	G	G	G			B			G	G	G	S	T	T	T	T		S	T	T	S	S	B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

	463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence	Y	S	S	T	K	A	A	S	D	L	I	V	K	A	W	V	R	S	F	G	V	K	A	T	I	S	N	C	S	N	N	Y	G	P	Y	Q	H	I	E	K	.	.	.	.	.	.	.	.	F	I	P	R	Q	I	T	N	I	L	A	G	I	K	P	K	L	Y	G	E	G	K	N	V	R	D	W	I	H	T	N	D
Template Known Secondary structure																																	S	T	T			T	T	S	.	.	.	.	.	.	.	.												T							T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

	543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S
Query Conservation
Alig confidence															.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	H	S	T	G	V	W	A	I	L	T	K	G	R	M	.	.	.	G	E	T	Y	L	I	G	A	D	G	.	E	K	N	N	K	E	V	L	E	L	I	L	E	K	M	G	Q	P	K	D	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	V	T	D	R	A	G	H	D	L	R	Y	A	I	D
Template Known Secondary structure														T	.	.	.	T								S		.															T	T			T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T				B			B
Template Predicted Secondary structure															.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	233	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.															.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

	623	.	.	.	.	.	.	630	.	.	.	.	.	.		.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence	I	R	N	A	H	R	C	L	D	W	E	P	K	I	.	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence	A	S	K	L	R	D	E	L	G	W	T	P	Q	F	T	D	F	S	E	G	L	E	E	T	I	Q	W	Y	T	D	N
Template Known Secondary structure													S																		T
Template Predicted Secondary structure
Template SS confidence
	295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions