Phyre 2 alignment of P77398 with d1kewa

Job Description P77398
Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012

Rank 26 Aligned Residues 317

% Identity 21% Template d1kewa_

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 1.80

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																										.
Query SS confidence																																										.	.	.	.	.	.																										.
Query Sequence	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	.	.	.	.	.	.	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	K	C	D	V	V	L	P
Query Conservation																																										.	.	.	.	.	.																										.
Alig confidence																									.																	.	.	.	.	.	.																										.
Template Conservation																									.
Template Sequence	M	K	I	L	I	T	G	G	A	G	F	I	G	S	A	V	V	R	H	I	I	K	N	T	.	Q	D	T	V	V	N	I	D	K	L	T	Y	A	G	N	L	E	S	L	S	D	I	S	E	S	N	R	Y	N	F	E	H	A	D	I	C	D	S	A	E	I	T	R	I	F	E	Q	Y	Q	P	D	A	V	M	H
Template Known Secondary structure							S	T	T	S															.	S											T	T			G	G	G	G	T	T	T	T	T		T	T								T	T															S
Template Predicted Secondary structure																									.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

	389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.											.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.				450	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	.	.	.	.	.	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	.	.	.	N	L	I	V	G	P
Query Conservation																																					.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation
Template Sequence	L	A	A	E	S	H	V	D	R	S	I	T	G	P	A	A	F	I	E	T	N	I	V	G	T	Y	A	L	L	E	V	A	R	K	Y	W	S	A	L	G	E	D	K	K	N	N	F	R	F	H	H	I	S	T	D	E	V	Y	G	D	L	P	H	P	D	E	V	E	N	S	V	T	L	P	L	F	T	E	T	T
Template Known Secondary structure			S											T								T																T	S																G	G	G	G						G	G	G	S		T	T	S					B		T	T	S
Template Predicted Secondary structure
Template SS confidence
	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

	456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence	A	Y	A	P	S	S	P	Y	S	A	S	K	A	S	S	D	H	L	V	R	A	W	R	R	T	Y	G	L	P	T	I	V	T	N	C	S	N	N	Y	G	P	Y	H	F	P	E	K	.	.	.	.	.	.	.	.	L	I	P	L	V	I	L	N	A	L	E	G	K	P	L	P	I	Y	G	K	G	D	Q	I	R
Template Known Secondary structure						S																																		S	T	T			T	T	S	.	.	.	.	.	.	.	.												T							T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

	536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D
Query Conservation
Alig confidence																			.	.	.														.																														.	.	.	.	.	.	.
Template Conservation																			.	.	.														.																														.	.	.	.	.	.	.
Template Sequence	D	W	L	Y	V	E	D	H	A	R	A	L	H	M	V	V	T	E	.	.	.	G	K	A	G	E	T	Y	N	I	G	G	H	N	.	E	K	K	N	L	D	V	V	F	T	I	C	D	L	L	D	E	I	V	P	K	A	T	S	Y	R	E	Q	I	.	.	.	.	.	.	.	T	Y	V	A	D	R	P	G	H
Template Known Secondary structure																			.	.	.			T	T										.																			S			S	S		G	G	G	G		.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																			.	.	.														.																														.	.	.	.	.	.	.
Template SS confidence
	232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300

	616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence	D	R	R	Y	A	I	D	A	G	K	I	S	R	E	L	G	W	K	P	L	E	T	F	E	S	G	I	R	K	T	V	E	W	Y	L	A	N
Template Known Secondary structure			B			B														S
Template Predicted Secondary structure
Template SS confidence
	301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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