Job Description P77398 Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012 Rank 27 Aligned Residues 317 % Identity 23% Template d1gy8a_ SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases Resolution 2.0

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																							.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	R	V	L	V	C	G	G	A	G	Y	I	G	S	H	F	V	R	A	L	L	R	D	T	N	H	S	V	V	I	V	D	S	L	V	G	T	H	G	K	S	D	H	V	E	T	R	E	N	V	A	R	K	L	Q	Q	S	D	G	P	K	P	P	W	A	D	R	Y	A	A	L	E	V	G	D	V	R	N	E
Template Known Secondary structure									T	T	T	S																									T	T	T	T	T			T	T	S													S		S	S			T	T	T	T								S		T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																												.
Query SS confidence											.	.																																												.
Query Sequence		S	E	W	I	E	Y	H	V	K	.	.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S
Query Conservation											.	.																																												.
Alig confidence											.	.																																												.																			.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		D	F	L	N	G	V	F	T	R	H	G	P	I	D	A	V	V	H	M	C	A	F	L	A	V	G	E	S	V	R	D	P	L	K	Y	Y	D	N	N	V	V	G	I	L	R	L	L	Q	A	M	L	L	H	K	C	D	K	I	I	F	S	S	S	A	A	I	F	G	N	P	T	M	N	.	.	.	.	.	A	E
Template Known Secondary structure											S																																											T	T										G	G	G	T	B	S					.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.						.	.
Predicted Secondary structure																																																					.																						.	.	.	.	.
Query SS confidence																																																					.																						.	.	.	.	.
Query Sequence		N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	.	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	.	.	.	.	.	G	S
Query Conservation																																																					.																						.	.	.	.	.
Alig confidence																																																					.																						.	.	.	.	.
Template Conservation
Template Sequence		P	I	D	I	N	A	K	K	S	P	E	S	P	Y	G	E	S	K	L	I	A	E	R	M	I	R	D	C	A	E	A	Y	G	I	K	G	I	C	L	R	Y	F	N	A	C	G	A	H	E	D	G	D	I	G	E	H	Y	Q	G	S	T	H	L	I	P	I	I	L	G	R	V	M	S	D	I	A	P	D	D	K
Template Known Secondary structure			B		T	T	S			B		S	S																																					T	T	S	S		S			S	T	T			S														S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		524	.	.	.	.	.	530	.							.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.							560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure										.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		P	I	K	L	I	D	G	G	.	.	.	.	.	.	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	.	.	.	.	.	.	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R
Query Conservation										.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																													.	.	.	.	.	.												.
Template Conservation																																																													.
Template Sequence		R	M	P	I	F	G	T	D	Y	P	T	P	D	G	T	C	V	R	D	Y	V	H	V	C	D	L	A	S	A	H	I	L	A	L	D	Y	V	E	K	L	G	P	N	D	K	S	K	Y	F	S	V	F	N	L	G	T	S	R	G	.	Y	S	V	R	E	V	I	E	V	A	R	K	T	T	G	H	P	I	P	V
Template Known Secondary structure								S		S	S	S	T	T	S	S																								T			T	T	T	G	G	G	S							S		S			.
Template Predicted Secondary structure																																																													.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	C	G	R	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	A	Y	L	V	A	A	S	D	K	A	R	E	V	L	G	W	K	P	K	Y	D	T	L	E	A	I	M	E	T	S	W	K	F	Q	R	T
Template Known Secondary structure								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S				B									T					S			S														T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.																.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions