Job Description P77398 Confidence 97.42% Date Thu Jan 5 12:28:36 GMT 2012 Rank 365 Aligned Residues 113 % Identity 18% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.								.	.	.	.	.	.	.	.	350	.	.							.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.												.	.	.	.	.	.
Query Sequence		S	Q	P	A	C	T	A	R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	.	.	.	.	.	.	.	E	V	Y	G	L	D	I	G	S	D	A	.	.	.	.	.	.	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H
Query Conservation																																						.	.	.	.	.	.	.												.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																								.		.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.																								.
Template Sequence		S	E	P	I	.	.	.	.	.	.	.	R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	.	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	D	V	I	A	T	D	K
Template Known Secondary structure						.	.	.	.	.	.	.						S	T	T	S	T											T	T	T	.	T	T		T	T											G	G	G														T			T	T								S
Template Predicted Secondary structure						.	.	.	.	.	.	.																								.
Template SS confidence
		1	.	.	.								.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	K	R	I	I	F	P	S
Query Conservation																																																						.	.	.
Alig confidence		.	.	.																											.	.																						.	.	.
Template Conservation		.	.	.																											.	.
Template Sequence		.	.	.	E	E	I	A	F	K	D	L	D	V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	.	.	D	L	L	K	A	N	V	K	I	F	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G
Template Known Secondary structure		.	.	.					T	T	T		S							S					S	S	S		S		.	.	T	T																			S		T	T							S
Template Predicted Secondary structure		.	.	.																											.	.
Template SS confidence
					73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions