Job Description P77398 Confidence 99.41% Date Thu Jan 5 12:28:36 GMT 2012 Rank 126 Aligned Residues 224 % Identity 13% Template c3v8bC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier PDBTitle: crystal structure of a 3-ketoacyl-acp reductase from sinorhizobium2 meliloti 1021 Resolution 2.70 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.						.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	.	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V	V
Query Conservation																																											.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																								.																			.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																								.
Template Sequence		A	L	I	T	G	A	G	S	G	I	G	R	A	T	A	L	A	L	A	A	D	G	.	V	T	V	G	A	L	G	R	T	R	T	E	V	E	E	V	A	D	E	I	V	G	A	G	G	Q	A	I	A	L	E	A	D	V	S	D	E	L	Q	X	R	N	A	V	R	D	L	V	L	K	F	G	H	L	D	I	V
Template Known Secondary structure						S	T	T	S													T	T	.								S	S														T	T	S									T	T																	S
Template Predicted Secondary structure																								.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.						.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.						.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																													.	.	.	.	.
Query SS confidence											.	.	.	.	.																													.	.	.	.	.
Query Sequence		L	P	L	V	A	I	A	T	P	.	.	.	.	.	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V
Query Conservation											.	.	.	.	.																													.	.	.	.	.
Alig confidence											.	.	.	.	.																													.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	N	A	G	I	N	G	V	W	A	P	I	D	D	L	K	P	F	E	W	D	E	T	I	A	V	N	L	R	G	T	F	L	T	L	H	L	T	V	P	Y	L	K	Q	R	G	G	G	A	I	V	V	V	S	S	I	N	G	T	R	T	F	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	T	S													T																	T	T										S	B	T	T	T	B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q
Query Conservation																										.	.	.
Alig confidence		.																								.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	G	A	T	A	Y	T	A	T	K	A	A	Q	V	A	I	V	Q	Q	L	A	L	E	L	G	K	H	H	I	R	V	N	A	V	C	P	G	A	I	E	T	N	I	S	D	N	T	K	L	R	H	E	.	.	.	.	.	.	.	.	.	.	E	E	T	A	I	P	V	E	W	P	K	G	Q	V	P	I	T
Template Known Secondary structure		.	T	T																							G	G	G	T									S		B	S	S		T	T			T	T					.	.	.	.	.	.	.	.	.	.				S						T	T		S		G	G	G
Template Predicted Secondary structure		.																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
			152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	Q	P	G	R	S	E	D	V	A	E	L	I	R	F	L	V	S	E	R	A	R	H	V	T	G	S	P	V	W	I	D	G	G
Template Known Secondary structure		T	T	S		B													T	S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions