Job Description P77398 Confidence 99.42% Date Thu Jan 5 12:28:36 GMT 2012 Rank 124 Aligned Residues 210 % Identity 21% Template c3un1D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:probable oxidoreductase; PDBTitle: crystal structure of an oxidoreductase from sinorhizobium meliloti2 1021 Resolution 2.45 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V	V	L
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																												.															.	.	.	.																								.	.	.	.	.	.
Template Conservation																												.															.	.	.	.
Template Sequence		Q	Q	K	V	V	V	I	T	G	A	S	Q	G	I	G	A	G	L	V	R	A	Y	R	D	R	N	.	Y	R	V	V	A	T	S	R	S	I	K	P	S	A	.	.	.	.	D	P	D	I	H	T	V	A	G	D	I	S	K	P	E	T	A	D	R	I	V	R	E	G	I	E	R	F	G	R	I	D	S	L	V
Template Known Secondary structure		S	S						S	S		S	S													T	T	.								S	S					S	.	.	.	.		T	T								T	T	S																S
Template Predicted Secondary structure																												.															.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.									.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																		.
Query SS confidence																						.	.	.	.	.	.	.	.																		.
Query Sequence		P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	.	.	.	.	.	.	.	.	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K
Query Conservation																						.	.	.	.	.	.	.	.																		.
Alig confidence																						.	.	.	.	.	.	.	.																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	A	G	V	F	L	A	K	P	F	V	E	X	T	Q	E	D	Y	D	H	N	L	G	V	N	V	A	G	F	F	H	I	T	Q	R	A	A	A	E	X	L	K	Q	G	S	G	H	I	V	S	I	T	T	S	L	V	D	Q	P	X	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X
Template Known Secondary structure												G	G	G													T	T																		T										T	T	T	T	S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	.	.	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R
Query Conservation																									.	.	.
Alig confidence																									.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		P	S	A	L	A	S	L	T	K	G	G	L	N	A	V	T	R	S	L	A	X	E	F	S	R	S	G	V	R	V	N	A	V	S	P	G	V	I	K	T	P	X	H	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	H	S	T	L	A	G	L	H	P	V	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure																								T	T	T	T	T											B			T	T	S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G						T	T	S	T	T	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.														.	.	.	190	.	.	.	.	.	.	.	.										.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		R	X	G	E	I	R	D	V	V	D	A	V	L	Y	L	E	H	A	G	F	.	.	I	T	G	E	I	L	H	V	D	G	G
Template Known Secondary structure				B																T	T	.	.			S						S	T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions