Job Description P77398 Confidence 99.27% Date Thu Jan 5 12:28:36 GMT 2012 Rank 179 Aligned Residues 219 % Identity 14% Template c3uf0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy) Resolution 2.00 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.						.	.	.
Predicted Secondary structure																																															.	.	.	.																								.	.	.	.	.
Query SS confidence																																															.	.	.	.																								.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	K	C	D
Query Conservation																																															.	.	.	.																								.	.	.	.	.
Alig confidence																												.																			.	.	.	.																								.	.	.	.	.
Template Conservation																												.
Template Sequence		A	G	R	T	A	V	V	T	G	A	G	S	G	I	G	R	A	I	A	H	G	Y	A	R	A	G	.	A	H	V	L	A	W	G	R	T	D	G	V	K	E	V	A	D	E	I	A	D	G	G	G	S	A	E	A	V	V	A	D	L	A	D	L	E	G	A	A	N	V	A	E	E	L	A	A	T	R	R	V	D
Template Known Secondary structure		T	T							T	T	T	S													T	T	.								S	S	T											T	T	T										T	T																S
Template Predicted Secondary structure																												.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.										.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	N	N	A	G	I	I	A	R	A	P	A	E	E	V	S	L	G	R	W	R	E	V	L	T	V	N	L	D	A	A	W	V	L	S	R	S	F	G	T	A	M	L	A	H	G	S	G	R	I	V	T	I	A	S	M	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q
Template Known Secondary structure															G	G	G														T																		T										G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																			.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K
Query Conservation																											.	.	.
Alig confidence																											.	.	.											.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		G	G	R	N	V	A	A	Y	A	A	S	K	H	A	V	V	G	L	T	R	A	L	A	S	E	W	A	G	R	G	V	G	V	N	A	L	A	P	.	.	.	.	G	Y	V	V	T	A	N	T	A	A	L	R	A	D	D	E	R	A	A	E	I	T	A	R	I	P	A	G	R	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S																							G	G	G	T									.	.	.	.		S	B		S	G	G	G					T	S											S	T	T	S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	W	A	T	P	E	D	M	V	G	P	A	V	F	L	A	S	D	A	A	S	Y	V	H	G	Q	V	L	A	V	D	G	G
Template Known Secondary structure		.	.	.	.		B		G	G	G	G									S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions