Job Description P77398 Confidence 99.10% Date Thu Jan 5 12:28:36 GMT 2012 Rank 264 Aligned Residues 208 % Identity 17% Template c3tl3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: structure of a short-chain type dehydrogenase/reductase from2 mycobacterium ulcerans Resolution 1.85 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.						.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	K	C	D	V	V	L	P	L	V	A	I
Query Conservation																																																																		.	.	.	.	.
Alig confidence																								.																					.																					.	.	.	.	.
Template Conservation																								.																					.
Template Sequence		A	V	V	T	G	G	A	S	G	L	G	L	A	T	T	K	R	L	L	D	A	G	.	A	Q	V	V	V	L	D	I	R	G	E	D	V	V	A	D	L	G	D	R	.	A	R	F	A	A	A	D	V	T	D	E	A	A	V	A	S	A	L	D	L	A	E	T	M	G	T	L	R	I	V	V	N	C	A	G	T
Template Known Secondary structure						T	T	T	S														T	.								S	S								T		T	T	.								T	T																S									G	G	G
Template Predicted Secondary structure																								.																					.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		393	.	.	.	.									.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.										.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Query Sequence		A	T	P	I	E	.	.	.	.	.	.	.	.	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	.	.	.	.	.	.	.	.	.	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P
Query Conservation							.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	A	I	R	V	L	S	R	D	G	V	F	S	L	A	A	F	R	K	I	V	D	I	N	L	V	G	S	F	N	V	L	R	L	A	A	E	R	I	A	K	T	E	P	V	N	A	E	E	R	G	V	I	I	N	T	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D
Template Known Secondary structure		S									T				S																											T	T	S								S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																			.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K
Query Conservation																											.	.	.
Alig confidence																											.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		G	Q	I	G	Q	A	A	Y	S	A	S	K	G	G	V	V	G	M	T	L	P	I	A	R	D	L	A	S	H	R	I	R	V	M	T	I	A	P	G	L	F	D	T	P	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	R	A	S	L	G	K	Q	V	P	.	.	.	.	.	.	.	.
Template Known Secondary structure																												G	G	G	T										S	B			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.										T	S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.														.	200	.	.	.	.	.	.	.	.	.	210
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		H	P	S	R	L	G	N	P	D	E	Y	G	A	L	A	V	H	I	I	E	.	.	N	P	M	L	N	G	E	V	I	R	L	D	G	A
Template Known Secondary structure		S	S		S		B															.	.		T	T			S						S	T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions