Job Description P77398 Confidence 96.83% Date Thu Jan 5 12:28:36 GMT 2012 Rank 407 Aligned Residues 107 % Identity 20% Template c3tl2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of bacillus anthracis str. ames malate dehydrogenase2 in closed conformation. Resolution 1.70 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350													.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																											.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation												.																																																										.	.	.	.	.	.	.	.
Template Sequence		K	R	K	K	V	S	V	I	G	A	.	G	F	T	G	A	T	T	A	F	L	L	A	Q	K	E	L	A	D	V	V	L	V	D	I	P	Q	L	E	N	P	T	K	G	K	A	L	D	M	L	E	A	S	P	V	Q	G	F	D	A	N	I	I	G	T	S	D	Y	.	.	.	.	.	.	.	.	A	D	T	A
Template Known Secondary structure												.	S													T	T										G	G	G																			T									S		G	.	.	.	.	.	.	.	.	G	G	G	T
Template Predicted Secondary structure												.																																																										.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S
Query Conservation																																													.	.
Alig confidence														.	.																														.	.
Template Conservation														.	.
Template Sequence		D	S	D	V	V	V	I	T	A	G	I	A	.	.	R	K	P	G	M	S	R	D	D	L	V	A	T	N	S	K	I	M	K	S	I	T	R	D	I	A	K	H	S	P	N	A	I	I	V	V	L	T
Template Known Secondary structure		T		S							S			.	.			T	T																										T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions