Job Description P77398 Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012 Rank 77 Aligned Residues 278 % Identity 17% Template c3sc6F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:dtdp-4-dehydrorhamnose reductase; PDBTitle: 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose2 reductase (rfbd) from bacillus anthracis str. ames in complex with3 nadp Resolution 2.65 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	K	C	D	V	V	L	P	L	V	A	I
Query Conservation																																																																						.
Alig confidence																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	E	R	V	I	I	T	G	A	N	G	Q	L	G	K	Q	L	Q	E	E	L	N	P	E	E	.	Y	D	I	Y	P	F	D	K	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	I	T	N	I	S	Q	V	Q	Q	V	V	Q	E	I	R	P	H	I	I	I	H	C	A	A	Y
Template Known Secondary structure										T	T	T	S										S		T	T	T	.								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T															S
Template Predicted Secondary structure																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.																	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		T	K	V	D	Q	A	E	K	E	R	D	L	A	Y	V	I	N	A	I	G	A	R	N	V	A	V	A	S	Q	L	V	G	A	K	L	V	Y	I	S	T	D	Y	V	F	Q	G	D	R	P	E	G	Y	D	E	F	H	N	P	.	.	.	.	.	.	.	A	P	I	N	I	Y	G	A	S	K	Y	A	G	E	Q
Template Known Secondary structure				T	T	G	G	G	T										T														T									S	T	T	S					S	S		B		T	T	S			.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E
Query Conservation
Alig confidence								.	.	.	.																			.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation								.	.	.	.																			.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		F	V	K	E	L	H	.	.	.	.	N	K	Y	F	I	V	R	T	S	W	L	Y	G	K	Y	G	N	N	.	.	.	.	.	.	.	.	.	.	F	V	K	T	M	I	R	L	G	K	E	R	E	E	I	S	.	.	V	V	A	D	Q	I	G	S	P	T	Y	V	A	D	L	N	V	M	I	N	K	L	I	H
Template Known Secondary structure								.	.	.	.	S	S								S				S	S	S			.	.	.	.	.	.	.	.	.	.													S				.	.				S																			T	T
Template Predicted Secondary structure								.	.	.	.																			.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		137	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D	W
Query Conservation
Alig confidence							.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.																							.
Template Conservation							.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		T	S	L	Y	G	.	.	.	.	T	Y	H	V	S	N	T	G	S	.	C	S	W	F	E	F	A	K	K	I	F	S	Y	A	N	M	K	V	N	V	L	P	V	S	T	.	.	.	.	.	.	.	.	.	.	E	E	F	G	A	A	A	A	R	P	K	Y	S	I	F	Q	H	N	M	L	R	L	.	N	G	F
Template Known Secondary structure		T					.	.	.	.							B	S		.														T	T											.	.	.	.	.	.	.	.	.	.				T		S	S				S				B								.	T	T
Template Predicted Secondary structure							.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		201	.	.	.	.					.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.											240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	M	P	S	W	E	E	G	L	E	R	F	F	I
Template Known Secondary structure						B
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions