Job Description P77398 Confidence 99.69% Date Thu Jan 5 12:28:36 GMT 2012 Rank 115 Aligned Residues 203 % Identity 16% Template c3r6dA_ PDB info PDB header:lyase, isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine Resolution 1.25 Å

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I
Query Conservation
Alig confidence																										.																																																						.	.
Template Conservation																										.																																																						.	.
Template Sequence		Y	I	T	I	L	G	A	A	G	Q	I	A	Q	L	T	A	T	L	L	T	Y	T	D	X	.	H	I	T	L	Y	G	R	Q	L	K	T	R	I	P	P	E	I	I	D	H	E	R	V	T	V	I	E	G	S	F	Q	N	P	G	L	E	Q	A	V	T	N	A	E	V	V	F	V	G	A	X	E	S	G	.	.
Template Known Secondary structure							S	T	T	S	T	T	T													.							S	S					S						T	S	T	T								T	T									T	T		S					S						.	.
Template Predicted Secondary structure																										.																																																						.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																.	.	.	.	.	.	.	.																												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.																												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	X	A	S	I	V	K	A	L	S	R	N	I	R	R	V	I	G	V	S	X	A	G	L	S	G	E	F	.	.	.	.	.	.	.	.	P	V	A	L	E	K	W	T	F	D	N	L	P	I	S	Y	V	Q	G	E	R	Q	A	R	N	V	L	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T	T	T	T	S		S	.	.	.	.	.	.	.	.											T	S																.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.																												.
Template SS confidence
																	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G
Query Conservation
Alig confidence		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	R	E	S	N	L	N	Y	T	I	L	R	L	T	W	L	Y	N	D	P	E	T	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	I	P	E	G	A	Q	F	N	D	A	Q	V	S	R	E	A	V	V	K	A	I	F	D	I	L	H	A	A	D
Template Known Secondary structure		.	.	.			S		S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S																					T		S
Template Predicted Secondary structure		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
			556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	T	P	F	H	R	T	S	I	G	V	G	E	P	G	T	H	Y
Template Known Secondary structure			G	G	G	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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