Job Description P77398 Confidence 99.27% Date Thu Jan 5 12:28:36 GMT 2012 Rank 177 Aligned Residues 224 % Identity 17% Template c3qljB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium Resolution 1.80 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		D	G	R	V	V	I	V	T	G	A	G	G	G	I	G	R	A	H	A	L	A	F	A	A	E	G	.	A	R	V	V	V	N	D	I	G	V	G	L	D	G	S	P	A	S	G	G	S	A	A	Q	S	V	V	D	E	I	T	A	A	G	G	E	A	V	A	D	G	S	N	V	A	D	W	D	Q	A	A	G	L
Template Known Secondary structure		T	T						T	T	T	T	S													T	T	.										B		T	T	S	S	B	T		T	T	S												T	T										T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		379	380	.							.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400					.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.												.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																				.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																				.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	K	.	.	.	.	.	.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	.	.	.	.	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	.	.	.	.	.	.	.	.	.	.	.	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G
Query Conservation					.	.	.	.	.	.																				.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																				.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	T	A	V	E	T	F	G	G	L	D	V	L	V	N	N	A	G	I	V	R	D	R	M	I	A	N	T	S	E	E	E	F	D	A	V	I	A	V	H	L	K	G	H	F	A	T	M	R	H	A	A	A	Y	W	R	G	L	S	K	A	G	K	A	V	D	G	R	I	I	N	T	S	S	G	A	G	L	Q
Template Known Secondary structure										S															B		G	G	G																																		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q
Query Conservation																																													.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	Q	G	N	Y	S	A	A	K	A	G	I	A	T	L	T	L	V	G	A	A	E	M	G	R	Y	G	V	T	V	N	A	I	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B																						G	G	G	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.																			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.																	570	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	A	S	I	E	E	L	G
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	T	R	F	D	A	M	A	P	E	N	V	S	P	L	V	V	W	L	G	S	A	E	A	R	D	V	T	G	K	V	F	E	V	E	G	G	K	I	R	V	A	E	G	W	A	H	G	P	Q	I	D	K	G	A	R	W	D	P	A	E	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T		G	G	G	T								T	S	G	G	G	T	T			S							T	T																	S	S				G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	V	A	D	L	L	G	K	A	R	P	P	V	P	V	Y
Template Known Secondary structure											S							B
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions