Job Description P77398 Confidence 98.84% Date Thu Jan 5 12:28:36 GMT 2012 Rank 297 Aligned Residues 172 % Identity 18% Template c3qivA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier- PDBTitle: crystal structure of a putative short-chain dehydrogenase or 3-2 oxoacyl-[acyl-carrier-protein] reductase from mycobacterium3 paratuberculosis atcc baa-968 / k-10 Resolution 2.25 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.						.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.
Predicted Secondary structure																																															.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	.	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K
Query Conservation																																															.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																												.																			.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																												.
Template Sequence		E	N	K	V	G	I	V	T	G	S	G	G	G	I	G	Q	A	Y	A	E	A	L	A	R	E	G	.	A	A	V	V	V	A	D	I	N	A	E	A	A	E	A	V	A	K	Q	I	V	A	D	G	G	T	A	I	S	V	A	V	D	V	S	D	P	E	S	A	K	A	M	A	D	R	T	L	A	E	F	G	G
Template Known Secondary structure		T	T							T	T	T	S													T	T	.								S															T	T										T	T	S																S
Template Predicted Secondary structure																												.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.								.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																	.	.	.	.	.	.	.																												.	.	.
Query Sequence		C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	.	.	.	.	.	.	.	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I
Query Conservation																	.	.	.	.	.	.	.																												.	.	.
Alig confidence																	.	.	.	.	.	.	.																												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	Y	L	V	N	N	A	A	I	F	G	G	M	K	L	D	F	L	L	T	I	D	P	E	Y	Y	K	K	F	M	S	V	N	L	D	G	A	L	W	C	T	R	A	V	Y	K	K	M	T	K	R	G	G	G	A	I	V	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														G	G	G	G	G		T	T	T	S																															T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D
Query Conservation																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	S	S	L	A	K	V	G	I	N	G	L	T	Q	Q	L	S	R	E	L	G	G	R	N	I	R	I	N	A	I	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																			T	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	D	L	V	G	M	C	L	F	L	L	S	D	E	A	S	W	I	T	G	Q	I	F	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.												S	G	G	G	T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions