Job Description P77398 Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012 Rank 6 Aligned Residues 297 % Identity 26% Template c3q0iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from vibrio cholerae Resolution 1.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	V	V	F	A	Y	H	D	M	G	C	L	G	I	E	A	L	L	A	A	G	Y	E	I	S	A	I	F	T	H	T	D	N	P	G	E	K	A	F	Y	G	S	V	A	R	L	A	A	E	R	G	I	P	V	Y	A	P	D	N	V	N	H	P	L	W	V	E	R	I	A	Q	L	S	P	D	V	I	F
Query Conservation
Alig confidence																																						.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		L	R	I	V	F	A	G	T	P	D	F	A	A	R	H	L	A	A	L	L	S	S	E	H	E	I	I	A	V	Y	T	Q	P	E	T	A	.	.	.	.	.	.	S	P	V	K	T	L	A	L	E	H	N	V	P	V	Y	Q	P	E	N	F	K	S	D	E	S	K	Q	Q	L	A	A	L	N	A	D	L	X	V
Template Known Secondary structure										S												T	S	S	S													.	.	.	.	.	.										T	T							S		S		S									T	T			S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	Y	Y	R	H	L	I	Y	D	E	I	L	Q	L	A	P	A	G	A	F	N	L	H	G	S	L	L	P	K	Y	R	G	R	A	P	L	N	W	V	L	V	N	G	E	T	E	T	G	V	T	L	H	R	M	V	K	R	A	D	A	G	A	I	V	A	Q	L	R	I	A	I	A	P	D	D	I	A	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	Y	G	L	L	L	P	K	V	V	L	D	T	P	K	L	G	C	I	N	V	H	G	S	I	L	P	R	W	R	G	A	A	P	I	Q	R	S	I	W	A	G	D	S	E	T	G	V	T	I	X	Q	X	D	V	G	L	D	T	G	D	X	L	K	I	A	T	L	P	I	E	A	S	D	T	S	A	S
Template Known Secondary structure			S	S			S								T	S	S	T	T							S	S	S	T	T	T	T	B	S	S										T		S											S	S	S	S		S												T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	H	K	L	C	H	A	A	R	Q	L	L	E	Q	T	L	P	A	I	K	H	G	N	I	L	E	I	A	Q	R	E	N	E	A	T	C	F	G	R	R	T	P	D	D	S	F	L	E	W	H	K	P	A	S	V	L	H	N	M	V	R	A	V	A	D	P	W	P	G	A	F	S	Y	V	G	N	Q	K	F
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		X	Y	D	K	L	A	E	L	G	P	Q	A	L	L	E	C	L	Q	D	I	A	Q	G	T	A	V	A	V	K	Q	D	D	G	L	A	N	Y	A	H	K	L	S	K	E	E	A	R	I	N	W	S	D	A	A	T	H	I	E	R	C	I	R	A	F	.	N	P	W	P	X	S	H	F	E	V	A	E	N	S	I
Template Known Secondary structure																								T					B				G	G	G			B										B			T	T	S	B											T	.	T	T	T	T							T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.
Predicted Secondary structure																										.	.																																	.	.
Query SS confidence																										.	.																																	.	.
Query Sequence		T	V	W	S	S	R	V	H	P	H	A	S	K	A	Q	P	G	S	V	I	S	V	A	P	.	.	L	L	I	A	C	G	D	G	A	L	E	I	V	T	G	Q	A	G	D	G	I	T	M	Q	G	S	Q	L	A	Q	T	L	.	.	G	L	V	Q	G	S	R	L
Query Conservation																										.	.																																	.	.
Alig confidence																										.	.																																	.	.
Template Conservation
Template Sequence		K	V	W	Q	A	R	V	E	T	R	A	V	T	Q	T	P	G	T	I	I	Q	A	D	K	S	G	I	Y	V	A	T	G	Q	D	V	L	V	L	E	S	L	Q	I	P	G	K	K	A	L	P	V	Q	D	I	L	N	A	R	A	D	W	F	S	V	G	S	Q	L
Template Known Secondary structure															S		T	T	B						T	T							S	B	S										T	T	S													T	T	T	T		T	T		B
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions