Job Description P77398 Confidence 99.33% Date Thu Jan 5 12:28:36 GMT 2012 Rank 147 Aligned Residues 222 % Identity 11% Template c3ppiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase type-2; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase type-2 from2 mycobacterium avium Resolution 2.00 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																				.	.																								.	.	.	.	.
Query SS confidence																																																				.	.																								.	.	.	.	.
Query Sequence		A	C	T	A	R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.
Query Conservation																																																				.	.																								.	.	.	.	.
Alig confidence									.																								.																			.	.																								.	.	.	.	.
Template Conservation									.																								.
Template Sequence		I	K	Q	F	E	G	A	.	S	A	I	V	S	G	G	A	G	G	L	G	E	A	T	V	R	R	L	H	A	D	G	.	L	G	V	V	I	A	D	L	A	A	E	K	G	K	A	L	A	D	E	L	G	N	R	A	E	F	V	S	T	N	V	T	S	E	D	S	V	L	A	A	I	E	A	A	N	Q	L	G
Template Known Secondary structure			G	G	G	T	T		.						T	T	T	S													T	T	.								S														T	T								T	T													T	T	S	S
Template Predicted Secondary structure									.																								.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
			382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.										.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.												.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	.	.	.	.	.	.	.	.	.	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S
Query Conservation		.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	L	R	Y	A	V	V	A	H	G	G	F	G	V	A	Q	R	I	V	Q	R	D	G	S	P	A	D	M	G	G	F	T	K	T	I	D	L	Y	L	N	G	T	Y	N	V	A	R	L	V	A	A	S	I	A	A	A	E	P	R	E	N	G	E	R	G	A	L	V	L	T	A	S	I	A	G	.	.	.	.	.
Template Known Secondary structure																			S	B		T	T	S		B														T																T	S				T	T	S											G	G	G	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L
Query Conservation																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	G	Q	I	G	Q	T	A	Y	A	A	A	K	A	G	V	I	G	L	T	I	A	A	A	R	D	L	S	S	A	G	I	R	V	N	T	I	A	P	G	T	M	K	T	P	I	M	E	S	V	G	.	.	.	.	.	.	.	.	.	.	E	E	A	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T	S			T	T																							G	G	G	T										S	B							T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
															156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																				.	.
Template Conservation										.	.	.	.	.	.	.	.																				.	.
Template Sequence		K	F	A	A	N	I	P	F	.	.	.	.	.	.	.	.	P	K	R	L	G	T	P	D	E	F	A	D	A	A	A	F	L	L	T	.	.	N	G	Y	I	N	G	E	V	M	R	L	D	G	A	Q	R
Template Known Secondary structure						T			S	.	.	.	.	.	.	.	.	S	S	S		B															.	.		S	S			S						S	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		213	.	.	.	.	.	.	220									.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions