Job Description P77398 Confidence 99.33% Date Thu Jan 5 12:28:36 GMT 2012 Rank 146 Aligned Residues 212 % Identity 17% Template c3p19A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative blue fluorescent protein; PDBTitle: improved nadph-dependent blue fluorescent protein Resolution 2.05 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V	V	L
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																												.																.																										.	.	.	.	.	.
Template Conservation																												.																.
Template Sequence		M	K	K	L	V	V	I	T	G	A	S	S	G	I	G	E	A	I	A	R	R	F	S	E	E	G	.	H	P	L	L	L	L	A	R	R	V	E	R	L	K	A	.	L	N	L	P	N	T	L	C	A	Q	V	D	V	T	D	K	Y	T	F	D	T	A	I	T	R	A	E	K	I	Y	G	P	A	D	A	I	V
Template Known Secondary structure										S	T	T	S													T	T	.								S							T	.	T			T	T								T	T																		S
Template Predicted Secondary structure																												.																.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.						.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.																				.	.	.	.	.
Query SS confidence																				.	.	.	.																				.	.	.	.	.
Query Sequence		P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	.	.	.	.	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K
Query Conservation																				.	.	.	.																				.	.	.	.	.
Alig confidence																				.	.	.	.																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	A	G	M	M	L	L	G	Q	I	D	T	Q	E	A	N	E	W	Q	R	M	F	D	V	N	V	L	G	L	L	N	G	M	Q	A	V	L	A	P	M	K	A	R	N	C	G	T	I	I	N	I	S	S	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	T	F	P
Template Known Secondary structure												T	T	T	S													T																		T										G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S			T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																			.	.	.	.	140
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R
Query Conservation																								.	.	.
Alig confidence																								.	.	.											.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	A	A	Y	C	G	T	K	F	A	V	H	A	I	S	E	N	V	R	E	E	V	A	A	S	N	V	R	V	M	T	I	A	P	.	.	.	.	S	A	V	K	T	E	L	L	S	H	T	T	S	Q	Q	I	K	D	G	Y	D	A	W	R	V	D	M	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T																							G	G	G	T									.	.	.	.		S	B	S	S	S	G	G	G	G		S															T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	V	L	A	A	D	D	V	A	R	A	V	L	F	A	Y	Q	Q	P	Q	N	V	C	I	R	E	I
Template Known Secondary structure		.		B															S		T	T
Template Predicted Secondary structure		.
Template SS confidence
			205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions