Job Description P77398 Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012 Rank 58 Aligned Residues 294 % Identity 15% Template c3oh8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91 Resolution 2.00 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A
Query Conservation
Alig confidence																													.											.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																													.											.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		S	P	L	T	V	A	I	T	G	S	R	G	L	V	G	R	A	L	T	A	Q	L	Q	T	G	G	H	.	E	V	I	Q	L	V	R	K	E	P	.	.	.	.	.	.	.	.	.	K	P	G	K	R	F	W	D	P	L	N	P	.	.	.	A	S	D	L	L	D	G	A	D	V	L	V	H	L	A	G	E	F
Template Known Secondary structure										S	T	T	S													T	T		.							S	S	S		.	.	.	.	.	.	.	.	.		T	T						T	T	S		.	.	.		T	T	T	T	T	T		S
Template Predicted Secondary structure																													.											.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D
Query Conservation																																	.	.
Alig confidence			.	.	.	.																											.	.																											.	.	.	.	.	.	.
Template Conservation			.	.	.	.																																																							.	.	.	.	.	.	.
Template Sequence		N	.	.	.	.	D	S	H	K	E	A	I	R	E	S	R	V	L	P	T	K	F	L	A	E	L	V	A	E	S	T	Q	C	T	T	X	I	S	A	S	A	V	G	F	Y	G	H	D	R	G	D	E	I	L	T	E	E	S	E	.	.	.	.	.	.	.	S	G	D	D	F	L	A	E	V	C	R	D	W	E
Template Known Secondary structure			.	.	.	.	G	G	G								T															S	S										G	G	G	G		S									T	T	S		.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure			.	.	.	.																																																							.	.	.	.	.	.	.
Template SS confidence
		218					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I
Query Conservation
Alig confidence										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	T	A	P	A	S	D	.	A	G	K	R	V	A	F	I	R	T	G	V	A	L	S	G	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	L	P	L	L	K	T	L	F	S	G	G	K	F	G	D	G	T	S	W	F	S	W	I	A	I	D	D	L	T	D	I	Y	Y	R	A	I
Template Known Secondary structure			T	T						.	T	T													B	T	T	B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T						T	T	S
Template Predicted Secondary structure										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.								.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.
Query Sequence		E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	.	.	.	.	.	.	.	S	I	R
Query Conservation																																																																								.	.	.	.	.	.	.
Alig confidence						.	.	.													.																																																			.	.	.	.	.	.	.
Template Conservation						.	.	.													.
Template Sequence		V	D	A	Q	.	.	.	I	S	G	P	I	N	A	V	A	P	N	P	.	V	S	N	A	D	X	T	K	I	L	A	T	Q	G	A	E	E	L	A	L	A	S	Q	R	T	A	P	A	A	L	E	N	L	S	H	T	F	R	Y	T	D	I	G	A	A	I	A	H	E	L	G	Y	E	Q	L	A	D	F	A	Q
Template Known Secondary structure				T	T	.	.	.								S		S			.										T	T				G	G	G	G	G	G													T	T				S		S	S										T					S
Template Predicted Secondary structure						.	.	.													.
Template SS confidence
		354	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	H	R	C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	E	I	E	A	N	L	E	D	P	E	E	V	E	Q	S	I	L	S	S	I	L	N	F	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions