Job Description P77398 Confidence 99.21% Date Thu Jan 5 12:28:36 GMT 2012 Rank 221 Aligned Residues 203 % Identity 13% Template c3o38D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis Resolution 1.95 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure															.																															.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence															.																															.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	.	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	.	.	.	.	.	.	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.
Query Conservation															.																															.	.	.	.	.	.																										.	.	.	.	.
Alig confidence															.														.																	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																													.
Template Sequence		K	G	K	V	V	L	V	T	A	A	A	G	T	G	I	G	S	T	T	A	R	R	A	L	L	E	G	.	A	D	V	V	I	S	D	Y	H	E	R	R	L	G	E	T	R	D	Q	L	A	D	L	G	L	G	R	V	E	A	V	V	C	D	V	T	S	T	E	A	V	D	A	L	I	T	Q	T	V	E	K	A
Template Known Secondary structure		T	T						S	S		S	S	S	S												T	T	.								S														T	T	S	S	S									T	T
Template Predicted Secondary structure																													.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
			382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.											.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure		.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N
Query Conservation		.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																											.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	L	D	V	L	V	N	N	A	G	L	G	G	Q	T	P	V	V	D	M	T	D	E	E	W	D	R	V	L	N	V	T	L	T	S	V	M	R	A	T	R	A	A	L	R	Y	F	R	G	V	D	H	G	G	V	I	V	N	N	A	S	V	L	G	W	R	A	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																	G	G	G														T																T	S	S											G	G	G	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L
Query Conservation																																.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	H	S	Q	S	H	Y	A	A	A	K	A	G	V	M	A	L	T	R	C	S	A	I	E	A	V	E	F	G	V	R	I	N	A	V	S	P	S	I	A	R	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	T	T																							G	G	G	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	A	F	G	R	A	A	E	P	W	E	V	A	A	T	I	A	F	L	A	S	D	Y	S	S	Y	M	T	G	E	V	V	S	V	S	S	Q	R	A
Template Known Secondary structure		.	.	.	.		T	T	S	S																S	G	G	G	T	T			S						S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions