Job Description P77398 Confidence 99.18% Date Thu Jan 5 12:28:36 GMT 2012 Rank 232 Aligned Residues 218 % Identity 12% Template c3nugA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti Resolution 1.79 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.
Predicted Secondary structure																																															.	.																								.	.	.	.	.	.
Query SS confidence																																															.	.																								.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V
Query Conservation																																															.	.																								.	.	.	.	.	.
Alig confidence																												.																			.	.																								.	.	.	.	.	.
Template Conservation																												.
Template Sequence		A	G	K	T	A	L	V	T	G	A	A	Q	G	I	G	K	A	I	A	A	R	L	A	A	D	G	.	A	T	V	I	V	S	D	I	N	A	E	G	A	K	A	A	A	A	S	I	G	K	K	A	R	A	I	A	A	D	I	S	D	P	G	S	V	K	A	L	F	A	E	I	Q	A	L	T	G	G	I	D	I
Template Known Secondary structure		T	T						T	T	T	T	S													T	T	.								S	S													T	T								T	T																	S			S
Template Predicted Secondary structure																												.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		386	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.							.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																																	.	.	.	.	.	.
Query SS confidence								.	.	.	.																																	.	.	.	.	.	.
Query Sequence		V	L	P	L	V	A	.	.	.	.	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P
Query Conservation								.	.	.	.																																	.	.	.	.	.	.
Alig confidence								.	.	.	.																																	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	N	N	A	S	I	V	P	F	V	A	W	D	D	V	D	L	D	H	W	R	K	I	I	D	V	N	L	T	G	T	F	I	V	T	R	A	G	T	D	Q	M	R	A	A	G	K	A	G	R	V	I	S	I	A	S	N	T	F	F	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														G	G	G														T																		T											T					T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K
Query Conservation																											.	.	.
Alig confidence		.	.																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	N	M	A	A	Y	V	A	A	K	G	G	V	I	G	F	T	R	A	L	A	T	E	L	G	K	Y	N	I	T	A	N	A	V	T	P	G	L	I	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	V	K	A	S	P	H	N	E	A	F	G	F	V	E	M	L	Q
Template Known Secondary structure		.	.	S	S																							G	G	G	T										S	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	S	G	G	G	G	G								S
Template Predicted Secondary structure		.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	K	G	K	G	Q	P	E	H	I	A	D	V	V	S	F	L	A	S	D	D	A	R	W	I	T	G	Q	T	L	N	V	D	A	G
Template Known Secondary structure		S	S		S		B														S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions