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Job DescriptionP77398
Confidence99.01%DateThu Jan 5 12:28:36 GMT 2012
Rank283Aligned Residues196
% Identity20%Templatec3n74A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-ketoacyl-(acyl-carrier-protein) reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from2 brucella melitensis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.....320.........330.........340.........350........ .360.........370.........380. ...
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Query Sequence  RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN. . HPHFHFVEGDISIHSEWIEYHVK. . . . . . . KCD
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Template Sequence  EGKVALITGAGSGFGEGMAKRFAKGG. AKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI
Template Known Secondary structure  TT
TTTSTT.
S

TT

TTSS


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   4.....10.........20......... 30.........40.........50.........60.........70.........80..
 
   385....390.........400.........410.........420... ......430.........440.........450.
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Query Sequence  VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY. . . . . . . . . . . . . RKRIIFPSTSEVYGMCSDKYFDEDHSNL
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Template Sequence  LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAS. . . . . . . . . . . . . . . . . . T
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S

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TTT



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   83......90.........100.........110.........120.........130.........140... .
 
   452.......460.........470....... ..480.........490.........500.........510.........520........
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Query Sequence  IVGPVNKPRWIYSVSKQLLDRVIWAY. . . GEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI
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Template Sequence  GAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVIPMG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTS

TT
GGGT

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   145....150.........160.........170.........180.........190.
 
   529530.........540.........550.........560........
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Query Sequence  DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP
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Template Sequence  . . . . . . . RLLKPDDLAEAAAFLCSPQASMITGVALDVDGG
Template Known Secondary structure  .......S


TSGGGTT

S
STT
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   217..220.........230.........240.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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