Return to main results Retrieve Phyre Job Id

Job DescriptionP77398
Confidence100.00%DateThu Jan 5 12:28:36 GMT 2012
Rank72Aligned Residues173
% Identity21%Templatec3n0vD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20 .........30.........40.........50.........60.... .....
Predicted Secondary structure 


......


























......
Query SS confidence 


















. . . . . .











































. . . . . .




Query Sequence  KTVVFAYHDMGCLGIEALL. . . . . . AAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNH. . . . . . PLWVE
Query Conservation 


  
        
  
 ......     
  
 
             
   
    

         ......     
Alig confidence 








..







......











..

.......




















......




Template Conservation 






  ..
  
  

     
 
  

  



..  .......     
    

   
      
   
     
Template Sequence  KVVIXVSKA. . DHCLNDLLYRQRIGQLGXDVVAVVSN. . HP. . . . . . . DLEPLAHWHKIPYYHFALDPKDKPGQERKVLQ
Template Known Secondary structure  SS
..
TTSS

S..SS.......TTTT




BTTB
Template Predicted Secondary structure 


..










..
.......








Template SS confidence 















































































   91........ 100.........110.........120..... .. ..130.........140.........150.........
 
   70.........80.........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  RIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLR
Query Conservation   
     
  
      

    
     
 

 
 



  

  

  

  
   



        
 
 
  
  
Alig confidence 















































































Template Conservation   
     





 
  

           









   
      
   
 
  
 


 
    
 



 
  
Template Sequence  VIEETGAELVILARYXQVLSPELCRRLDGWAINIHHSLLPGFKGAKPYHQAYNKGVKXVGATAHYINNDLDEGPIIAQGV
Template Known Secondary structure  TT
SSS

S


TTTS

STT


S
T
S

SSTT
S
Template Predicted Secondary structure 






























Template SS confidence 















































































   160.........170.........180.........190.........200.........210.........220.........230.........
 
   150.........160.........170.........180.....
Predicted Secondary structure 









Query SS confidence 



































Query Sequence  IAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNI
Query Conservation    
    
   
   
       
   
        
Alig confidence 



































Template Conservation    
   

   
       
   
  

    
 

Template Sequence  EVVDHSHYPEDLIAKGRDIECLTLARAVGYHIERRV
Template Known Secondary structure 

TT

TT
Template Predicted Secondary structure 








Template SS confidence 



































   240.........250.........260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions