Job Description P77398 Confidence 98.62% Date Thu Jan 5 12:28:36 GMT 2012 Rank 315 Aligned Residues 200 % Identity 16% Template c3ksuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-oxoacyl-acyl carrier protein reductase; PDBTitle: crystal structure of short-chain dehydrogenase from2 oenococcus oeni psu-1 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.									.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	.	.	.	.	.	.	.	.	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.																											.	.	.	.
Alig confidence																												.																.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																												.
Template Sequence		K	N	K	V	I	V	I	A	G	G	I	K	N	L	G	A	L	T	A	K	T	F	A	L	E	S	.	V	N	L	V	L	H	Y	H	Q	A	K	D	S	D	T	A	N	K	L	K	D	E	L	E	D	Q	G	A	K	V	A	L	Y	Q	S	D	L	S	N	E	E	E	V	A	K	L	F	D	F	A	E	K	E
Template Known Secondary structure		T	T							T		S	S											T	T	S	S	.								S		G	G	G													T	T	T												S
Template Predicted Secondary structure																												.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
				382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.					.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure		.	.																												.	.	.	.																	.	.	.
Query SS confidence		.	.																												.	.	.	.																	.	.	.
Query Sequence		.	.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	.	.	.	.	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I
Query Conservation		.	.																												.	.	.	.																	.	.	.
Alig confidence		.	.																												.	.	.	.																	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	K	V	D	I	A	I	N	T	V	G	K	V	L	K	K	P	I	V	E	T	S	E	A	E	F	D	A	M	D	T	I	N	N	K	V	A	Y	F	F	I	K	Q	A	A	K	H	M	N	P	N	G	H	I	I	T	I	A	T	S	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S													S	S		G	G	G																										T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	.	.	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D
Query Conservation																															.	.	.
Alig confidence		.	.	.	.	.	.																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	A	Y	T	G	F	Y	S	T	A	P	V	E	H	Y	T	R	A	A	S	K	E	L	M	K	Q	Q	I	S	V	N	A	I	A	P	G	P	M	D	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	Y
Template Known Secondary structure		.	.	.	.	.	.																							T	T	T	T	T													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																															.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		G	Q	E	M	G	N	Q	L	T	K	I	E	D	I	A	P	I	I	K	F	L	T	T	D	.	G	W	W	I	N	G	Q	T	I	F	A	N	G	G
Template Known Secondary structure		T							S			G	G	G	T									T	T	.	T	T	T			S						S	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions