Job Description P77398 Confidence 99.42% Date Thu Jan 5 12:28:36 GMT 2012 Rank 123 Aligned Residues 229 % Identity 13% Template c3ijrF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+ Resolution 2.05 Å

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		303	.	.	.	.	.	.	310	.	.	.									.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.							360	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Query Sequence		R	L	N	S	Q	P	A	C	T	A	R	.	.	.	.	.	.	.	.	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	.	.	.	.	.	.	P	H	F	H	F	V	E	G	D
Query Conservation													.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																											.																				.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		L	X	N	P	L	P	Q	F	E	D	P	N	Y	K	G	S	E	K	L	K	G	K	N	V	L	I	T	G	G	D	S	G	I	G	R	A	V	S	I	A	F	A	K	E	G	.	A	N	I	A	I	A	Y	L	D	E	E	G	D	A	N	E	T	K	Q	Y	V	E	K	E	G	V	K	C	V	L	L	P	G	D
Template Known Secondary structure		G		S	S							T	T					S	T	T	T	T							T	T	T	S													T	T	.								S	S														T	T	T	S							S
Template Predicted Secondary structure																																															.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.														.	.	.	.	.																															.	.	.
Query SS confidence															.	.	.	.	.	.														.	.	.	.	.																															.	.	.
Query Sequence		I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V	V	L	P	L	V	A	I	A	T	.	.	.	.	.	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	K	R	I	I	F	P	S	T	S	E
Query Conservation															.	.	.	.	.	.														.	.	.	.	.																															.	.	.
Alig confidence															.	.	.	.	.	.														.	.	.	.	.																															.	.	.
Template Conservation
Template Sequence		L	S	D	E	Q	H	C	K	D	I	V	Q	E	T	V	R	Q	L	G	S	L	N	I	L	V	N	N	V	A	Q	Q	Y	P	Q	Q	G	L	E	Y	I	T	A	E	Q	L	E	K	T	F	R	I	N	I	F	S	Y	F	H	V	T	K	A	A	L	S	H	L	K	Q	G	D	V	I	I	N	T	A	S	I	V
Template Known Secondary structure		T	T	S																S																S	S	G	G	G														T												T	T			T	T									T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A
Query Conservation																																																.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																								.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Sequence		A	Y	E	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	I	D	Y	S	A	T	K	G	A	I	V	A	F	T	R	S	L	S	Q	S	L	V	Q	K	G	I	R	V	N	G	V	A	P	G	P	I	W	T	P	L	I	P	S	S	F	D	.	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																							G	G	G	T										S	B		S	T	T	T	T	T	T	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.																			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence		.														.	.	.	.	.	.	.	.	.
Template Conservation		.														.	.	.	.	.	.	.	.	.
Template Sequence		.	E	K	K	V	S	Q	F	G	S	N	V	P	X	.	.	.	.	.	.	.	.	.	Q	R	P	G	Q	P	Y	E	L	A	P	A	Y	V	Y	L	A	S	S	D	S	S	Y	V	T	G	Q	X	I	H	V	N	G	G
Template Known Secondary structure		.					T	T	T	T	T	T	S	T	T	.	.	.	.	.	.	.	.	.	S	S		B		G	G	G	T									S	G	G	G	T	T			S						S	S	S
Template Predicted Secondary structure		.														.	.	.	.	.	.	.	.	.
Template SS confidence
			237	.	.	240	.	.	.	.	.	.	.	.	.										250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions