Job Description P77398 Confidence 99.96% Date Thu Jan 5 12:28:36 GMT 2012 Rank 95 Aligned Residues 277 % Identity 17% Template c3i5mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera Resolution 2.72 Å

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																										.
Query SS confidence																																										.	.	.	.	.	.																										.
Query Sequence		R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	.	.	.	.	.	.	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	K	C	D	V	V	L	P	L
Query Conservation																																										.	.	.	.	.	.																										.
Alig confidence																										.																.	.	.	.	.	.																										.
Template Conservation																										.
Template Sequence		R	V	L	I	A	G	A	T	G	F	I	G	Q	F	V	A	T	A	S	L	D	A	H	R	.	P	T	Y	I	L	A	R	P	G	P	R	S	P	S	K	A	K	I	F	K	A	L	E	D	K	G	A	I	I	V	Y	G	L	I	N	E	Q	E	A	M	E	K	I	L	K	E	H	E	I	D	I	V	V	S	T
Template Known Secondary structure								T	T	S													T	T		.								S	S																T	T								T	T													T
Template Predicted Secondary structure																										.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q
Query Conservation																																					.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	G	E	S	I	L	D	Q	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	K	A	M	K	A	V	G	T	I	K	R	F	L	P	S	E	F	G	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	R	A	D	P	V	E	P	G	L	N	M	Y	R	E	K	R
Template Known Secondary structure				T	T	S	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S					S			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T					T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.																.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.															.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y
Query Conservation
Alig confidence								.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	R	Q	L	V	.	.	.	.	E	E	S	G	I	P	F	T	Y	I	C	C	N	S	I	A	S	W	P	Y	Y	N	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	P	T	D	F	F	Q	I	Y	G	D	G	N	V	K	A	Y	F	V	A	G	T	D	I	G	K	F	T	M
Template Known Secondary structure								.	.	.	.			T	T			B									S	S						.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S						T	T	S
Template Predicted Secondary structure								.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.														.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.														.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.														.
Template Sequence		K	T	V	D	D	V	R	.	T	L	N	K	S	V	H	F	R	P	S	C	N	.	C	L	N	I	N	E	L	A	S	V	W	E	K	K	I	G	R	T	L	P	R	V	T	V	T	E	D	D	L	L	A	A	A	G	E	N	I	I	P	Q	S	V	V	A	A	F	T	H	D	I	F	I	K	G	C	Q	V	N
Template Known Secondary structure				T	T		G	G	.	G	T	T								G	G	G	.																T	S																	T	T			T	T													T	T		T	T	T	S
Template Predicted Secondary structure									.														.
Template SS confidence
		207	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	.	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L
Query Conservation																	.
Alig confidence																	.						.
Template Conservation																							.
Template Sequence		F	S	I	D	G	P	E	D	V	E	V	T	T	L	Y	P	E	D	S	F	R	.	T	V	E	E	C	F	G	E	Y	I
Template Known Secondary structure		S				S	T	T								S	T	T					.										T
Template Predicted Secondary structure																							.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions