Job Description P77398 Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012 Rank 86 Aligned Residues 269 % Identity 15% Template c3gpiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus Resolution 1.44 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A
Query Conservation
Alig confidence												.																.														.	.	.	.	.																															.	.	.	.	.
Template Conservation												.																.														.	.	.	.	.																															.	.	.	.	.
Template Sequence		S	L	S	K	I	L	I	A	G	C	.	G	D	L	G	L	E	L	A	R	R	L	T	A	Q	G	.	H	E	V	T	G	L	R	R	S	A	Q	P	M	.	.	.	.	.	P	A	G	V	Q	T	L	I	A	D	V	T	R	P	D	T	L	A	S	I	V	H	L	R	P	E	I	L	V	Y	.	.	.	.	.
Template Known Secondary structure												.	S													T	T	.									T	T	S			.	.	.	.	.		T	T								T	T		G	G	G		T	T	G	G	G	G			S					.	.	.	.	.
Template Predicted Secondary structure												.																.														.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R
Query Conservation																																	.
Alig confidence		.	.	.	.	.																											.																											.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	C	V	A	A	S	E	Y	S	L	S	Y	V	E	G	L	R	N	T	L	S	A	L	E	G	A	P	L	Q	H	V	F	F	V	S	S	T	G	V	Y	G	Q	E	V	E	E	W	L	D	E	D	T	P	P	.	.	.	.	.	.	.	I	A	K	D	F	S	G	K	R	M	L	E	A	E	A
Template Known Secondary structure		.	.	.	.	.											S											T	T	T	S											G	G	G						S	S				T	T	S			.	.	.	.	.	.	.				S
Template Predicted Secondary structure		.	.	.	.	.																																																						.	.	.	.	.	.	.
Template SS confidence
							68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E
Query Conservation
Alig confidence				.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	.	.	.	.	.	.	A	A	Y	S	S	T	I	L	R	F	S	G	I	Y	G	P	G	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	I	R	Q	A	Q	T	P	E	Q	W	P	A	R	N	A	W	T	N	R	I	H	R	D	D	G	A	A	F	I	A	Y	L	I	Q
Template Known Secondary structure			G	.	.	.	.	.	.	G	G	S	S											B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		G	G	G	S		S	S	B
Template Predicted Secondary structure				.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D	W
Query Conservation
Alig confidence																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		Q	R	S	H	A	V	P	E	R	L	Y	I	V	T	D	N	Q	P	.	L	P	V	H	D	L	L	R	W	L	A	D	R	Q	G	I	A	Y	P	A	G	A	T	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	G	N	K	K	L	S	N	A	R	L	L	A	.	S	G	Y
Template Known Secondary structure				T	T	S				S							S			.														T	T						S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S											.	T	T
Template Predicted Secondary structure																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240																			.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.
		633	.	.	.		.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		E	P	K	I	.	D	M	Q	E	T	I	D	E	T	L	D	F	F
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		Q	L	I	Y	P	D	Y	V	S	G	Y	G	A	L	L	A	A	M
Template Known Secondary structure				S	S		S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions