Job Description P77398 Confidence 99.11% Date Thu Jan 5 12:28:36 GMT 2012 Rank 263 Aligned Residues 212 % Identity 13% Template c3emkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: 2.5a crystal structure of glucose/ribitol dehydrogenase2 from brucella melitensis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.
Predicted Secondary structure																																															.	.																								.	.	.	.	.	.
Query SS confidence																																															.	.																								.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V
Query Conservation																																															.	.																								.	.	.	.	.	.
Alig confidence																												.																			.	.																								.	.	.	.	.	.
Template Conservation																												.
Template Sequence		T	G	R	K	A	L	V	T	G	A	T	G	G	L	G	E	A	I	A	R	A	L	H	A	Q	G	.	A	I	V	G	L	H	G	T	R	E	E	K	L	K	E	L	A	A	E	L	G	E	R	I	F	V	F	P	A	N	L	S	D	R	E	A	V	K	A	L	G	Q	K	A	E	E	E	M	G	G	V	D	I
Template Known Secondary structure		T	T						T	T	T	T	S													T	T	.								S														S	S								T	T																T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.										.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	N	N	A	G	I	T	R	D	G	L	F	V	R	M	S	D	E	D	W	D	A	V	L	T	V	N	L	T	S	V	F	N	L	T	R	E	L	T	H	P	M	M	R	R	R	N	G	R	I	I	N	I	T	S	I	V	G	V	T	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														G	G	G														T																	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	.	.	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q
Query Conservation																											.	.	.
Alig confidence		.																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		.	P	G	Q	A	N	Y	C	A	S	K	A	G	L	I	G	F	S	K	S	L	A	Q	E	I	A	S	R	N	V	T	V	N	C	I	A	P	G	F	I	E	S	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	Q	K	D	A	I	M	G	N	I	P	M	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	T	T																							G	G	G	T										S	B	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T		T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
			147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																190	.	.	.	.	.	.	.	.	.	200	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	R	M	G	V	G	A	D	I	A	A	A	V	V	Y	L	A	S	D	E	A	A	Y	V	T	G	Q	T	L	H	V	N	G	G
Template Known Secondary structure		.		S		B														S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions