Job Description P77398 Confidence 99.97% Date Thu Jan 5 12:28:36 GMT 2012 Rank 90 Aligned Residues 280 % Identity 14% Template c3e48B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of a nucleoside-diphosphate-sugar epimerase2 (sav0421) from staphylococcus aureus, northeast structural genomics3 consortium target zr319 Resolution 1.60 Å

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		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P
Query Conservation
Alig confidence																																													.																			.
Template Conservation																																													.																			.
Template Sequence		X	N	I	X	L	T	G	A	T	G	H	L	G	T	H	I	T	N	Q	A	I	A	N	H	I	D	H	F	H	I	G	V	R	N	V	E	K	V	P	D	D	W	R	.	G	K	V	S	V	R	Q	L	D	Y	F	N	Q	E	S	X	V	E	.	A	F	K	G	X	D	T	V	V	F	I	P	S	I	I	H	P
Template Known Secondary structure								T	T	T	S													T	T		S	S						S		G	G	G	S		G	G	G	B	.	T	T	B							T	T								.			T	T		S											S
Template Predicted Secondary structure																																													.																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I
Query Conservation																															.
Alig confidence			.	.	.	.	.	.	.	.	.	.																			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	F	K	R	I	P	E	V	E	N	L	V	Y	A	A	K	Q	S	G	V	A	H	I	I	F	I	G	Y	Y	A	D	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	P	F	H	X	S	P	Y	F	G	Y	A	S	R	L	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.				T														T										S			S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79											80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A
Query Conservation
Alig confidence						.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	S	G	.	.	.	.	I	D	Y	T	Y	V	R	X	A	X	Y	X	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	K	P	Y	L	P	E	L	X	N	X	H	K	L	I	Y	P	A	G	D	G	R	I	N	Y	I	T	R	N	D	I	A	R	G	V	I	A	I	I	K	N	P
Template Known Secondary structure						.	.	.	.												S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												T							T	T																						G
Template Predicted Secondary structure						.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.							620	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	.	.	.	.	.	.	K	P	S	I	R	N	A	H	R
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence			.	.											.	.																																																			.	.	.	.	.	.
Template Conservation			.	.											.	.
Template Sequence		D	.	.	T	W	G	K	R	Y	L	L	S	G	.	.	Y	S	Y	D	X	K	E	L	A	A	I	L	S	E	A	S	G	T	E	I	K	Y	E	P	V	S	L	E	T	F	A	E	X	Y	D	E	P	K	G	F	G	A	L	L	A	S	X	Y	H	A	G	A	R	G	L	L	D	Q	E	S	N	D	F	K	Q
Template Known Secondary structure		G	.	.	G	T	T	S							.	.																	S	S															T	T			S	T	T														T	T	T	T					S
Template Predicted Secondary structure			.	.											.	.
Template SS confidence
		189			190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		L	V	N	D	Q	P	Q	.	T	L	Q	S	F	L	Q	E	N	I	L	E	H	H	H	H
Template Known Secondary structure				S	S				.							T	T	S					S	S
Template Predicted Secondary structure									.
Template SS confidence
		265	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions