Return to main results Retrieve Phyre Job Id

Job DescriptionP77398
Confidence99.93%DateThu Jan 5 12:28:36 GMT 2012
Rank102Aligned Residues212
% Identity20%Templatec3dqpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase ylbe; PDBTitle: crystal structure of the oxidoreductase ylbe from2 lactococcus lactis, northeast structural genomics3 consortium target kr121.
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   316...320.........330.........340.........350.........360.........370.........380.........390.....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP
Query Conservation 













 

  

  
 
 
  
 
                
  

              
 





    
Alig confidence 























.














...




































Template Conservation   








 

  
   
   
.  
    
       ...                         
 

        
Template Sequence  XKIFIVGSTGRVGKSLLKSLSTTD. YQIYAGARKVEQVPQ. . . YNNVKAVHFDVDWTPEEXAKQLHGXDAIINVSGSGGK
Template Known Secondary structure 
STTSTTSS.
SSGGGS

...
TT

TTS
TTTTT
S



TTS
Template Predicted Secondary structure 






.


...
















Template SS confidence 















































































   1........10.........20.... .....30......... 40.........50.........60.........70......
 
   396...400.........410.........420.... .....430.........440.........450.........460.........470....
Predicted Secondary structure 


.






























Query SS confidence 




























.

















































Query Sequence  IEYTRNPLRVFELDFEENLRIIRYCVKYR. KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI
Query Conservation               

 

 




     . 


  

  


        

           
 
 
  

  

   
Alig confidence 




........















.












...........

























Template Conservation       ........                    
  

     ...........                          
Template Sequence  SLLKV. . . . . . . . DLYGAVKLXQAAEKAEVKRFILLSTIFSLQ. . . . . . . . . . . PEKWIGAGFDALKDYYIAKHFADLYL
Template Known Secondary structure  S



........

TT



TTTT
...........GGG

ST
Template Predicted Secondary structure 

........







...........












Template SS confidence 















































































   77..80. ........90.........100.........110. ........120.........130.......
 
   475....480.........490.........500.........510.........520.........530.........540.........550....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA
Query Conservation         

   



  



               
   
   
 
  
 
 
 
   



 
 


 

   
   
Alig confidence  ...






















..........................



























Template Conservation  ...         
 
           ..........................           
   


      
   
Template Sequence  . . . TKETNLDYTIIQPGALTEEEATG. . . . . . . . . . . . . . . . . . . . . . . . . . LIDINDEVSASNTIGDVADTIKELVXTD
Template Known Secondary structure  ...S



S
S


S..........................SSS



T
G
Template Predicted Secondary structure  ...












..........................













Template SS confidence 















































































   138.140.........150.........160 .........170.........180........
 
   555....560.........570.........580...
Predicted Secondary structure 











Query SS confidence 




























Query Sequence  GNRCDGEIINIGNPENEASIEELGEMLLA
Query Conservation       
 





     

 

   
  
Alig confidence 
..











..











Template Conservation   ..  
       
 ..  
 
 
  
  
Template Sequence  H. . SIGKVISXHNGK. . TAIKEALESLLE
Template Known Secondary structure  G..GTT..TTTT
Template Predicted Secondary structure 
..








..

Template SS confidence 




























   189 190.........200. ........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions