Job Description P77398 Confidence 96.28% Date Thu Jan 5 12:28:36 GMT 2012 Rank 453 Aligned Residues 105 % Identity 13% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																		.	.																		.	.	.	.
Query SS confidence																																		.	.																		.	.	.	.
Query Sequence		C	T	A	R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	.	.	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C
Query Conservation																																		.	.																		.	.	.	.
Alig confidence																.																.		.	.																		.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																.																.																																				.	.	.	.	.	.	.	.
Template Sequence		S	S	K	S	T	V	N	K	I	T	V	V	G	G	.	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	.	I	A	D	R	L	V	L	L	D	L	S	E	G	T	K	G	A	T	M	D	L	E	I	F	N	L	P	N	V	E	I	S	K	D	L	.	.	.	.	.	.	.	.	S	A	S	A	H	S
Template Known Secondary structure																.	S														T	.			S								S		G	G	G		T	T							T		T	T					S		G	.	.	.	.	.	.	.	.	G	G	G	T	T
Template Predicted Secondary structure																.																.																																				.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S
Query Conservation																																											.	.
Alig confidence										.	.	.	.	.	.	.																											.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		K	V	V	I	F	T	V	N	.	.	.	.	.	.	.	S	Q	S	Y	L	D	V	V	Q	S	N	V	D	M	F	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	S
Template Known Secondary structure		S								.	.	.	.	.	.	.																	T	T								S	T	T							S
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions