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Job DescriptionP77398
Confidence99.91%DateThu Jan 5 12:28:36 GMT 2012
Rank104Aligned Residues215
% Identity17%Templatec3dhnA_
PDB info PDB header:isomerase, lyaseChain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of the putative epimerase q89z24_bactn2 from bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr310.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA
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Template Sequence  KVKKIVLIGASGFVGSALLNEALNRG. FEVTAVVRHPEKIKIE. . NEHLKVKKADVSSLDEVCE. VCKGADAVISAFNPI
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T

TTT.

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   3......10.........20........ .30.........40.... .....50.........60... ......70........
 
   394.....400.........410.........420.... .....430.........440.........450.........460.........470..
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Query Sequence  TPIEYTRNPLRVFELDFEENLRIIRYCVKYR. KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR
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Template Sequence  YDETIK. . . . . . . . . . . . VYLTIIDGVKKAGVNRFLXVGGAGSLFIA. . . . . . . . PGLRLXDSGEVPENILPGVKALGEF
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S............TT
S

STTS........TTGGGTT
S
GGG
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   85....90 .........100.........110......... 120.........130.........140....
 
   473......480.........490.........500.........510.........520.........530.........540.........550..
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Query Sequence  VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE
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Template Sequence  YLNFLXKEKEIDWVFFSPAADXRPGVRTGRYRLGKDDX. . . . . . . . . . . . . . . . . . IVDIVGNSHISVEDYAAAXIDELE
Template Known Secondary structure  TGGG

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   145....150.........160.........170.........180.. .......190.........200......
 
   553......560.........570..
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Query Sequence  NAGNRCDGEIINIGNPENEA
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Template Sequence  HPK. . HHQERFTIGYLEHHH
Template Known Secondary structure  S

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   207.. 210.........220....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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